Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_2958 and Pf1N1B4_2959 are separated by 334 nucleotidesPf1N1B4_2959 and Pf1N1B4_2960 are separated by 28 nucleotidesPf1N1B4_2960 and Pf1N1B4_2961 are separated by 315 nucleotidesPf1N1B4_2961 and Pf1N1B4_2962 are separated by 113 nucleotides Pf1N1B4_2958 - Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-), at 3,311,821 to 3,312,210 _2958 Pf1N1B4_2959 - FIG067310: hypothetical protein, at 3,312,545 to 3,314,434 _2959 Pf1N1B4_2960 - FIG002188: hypothetical protein, at 3,314,463 to 3,315,827 _2960 Pf1N1B4_2961 - Transcriptional regulator, LuxR family, at 3,316,143 to 3,318,881 _2961 Pf1N1B4_2962 - Alkaline phosphatase (EC 3.1.3.1), at 3,318,995 to 3,324,145 _2962
Group Condition Pf1N1B4_2958 Pf1N1B4_2959 Pf1N1B4_2960 Pf1N1B4_2961 Pf1N1B4_2962
carbon source Tween 20 (C) +0.5 -2.6 -2.7 -1.5 -0.1
stress Benzethonium chloride 0.0125 mM -1.1 -1.6 -0.0 -0.4 -0.1
carbon source a-Ketoglutaric (C) -1.7 -0.7 +0.2 -0.3 +0.0
stress Thallium(I) acetate 0.008 mg/ml -2.0 -0.1 +0.0 -0.3 +0.0
temperature LB 37C -1.0 -1.1 +0.0 -0.2 +0.1
nitrogen source nitrogen source nitrite 0.1mM -0.4 -1.1 -0.0 -0.3 -0.2
stress copper (II) chloride 2.5 mM -0.9 -0.4 -0.3 -0.5 +0.2
stress Cisplatin 0.006 mg/ml +0.2 -1.9 -0.1 -0.0 -0.1
stress 1-ethyl-3-methylimidazolium chloride 80 mM +0.2 -2.1 +0.0 -0.1 +0.2
stress Gentamicin 0.001 mg/ml -0.8 -0.9 -0.0 -0.2 +0.2
stress Choline chloride 200 mM +0.4 -1.7 -0.0 -0.5 +0.2
carbon source carbon source Sucrose 1mM -0.8 -0.9 +0.0 +0.2 +0.1
pH Minimal media pH9 -1.4 -0.7 +0.3 +0.4 +0.1
carbon source L-Lactate (C) -1.4 +0.3 +0.1 -0.1 +0.1
carbon source a-Ketoglutaric (C) -1.3 +0.3 +0.2 -0.3 +0.1
stress nitrate 100 mM +1.3 -2.1 +0.1 -0.2 +0.0
pH Minimal media pH9 -1.1 -0.2 +0.4 +0.2 -0.1
carbon source carbon source Sucrose 0.25mM +0.9 -0.9 -0.4 -0.6 +0.1
stress Cisplatin 0.006 mg/ml +1.2 -1.8 -0.0 -0.1 +0.0
stress Chloride 300 mM +1.2 -1.6 -0.1 -0.1 -0.1
carbon source m-Inositol (C) +1.1 -0.9 -0.2 -0.5 -0.2
stress Carbenicillin 2 mg/ml +0.7 -1.5 +0.1 +0.1 +0.1
denitrifying Nitrate reduction, replicate A t1 -1.1 +0.6 +0.2 +0.1 +0.1
carbon source carbon source Sucrose 5mM +0.9 -1.0 +0.0 -0.3 +0.3
nitrogen source D-Glucosamine Hydrochloride (N) +0.7 -0.9 +0.2 +0.2 -0.1
carbon source Cytidine (C) +1.1 -0.5 -0.2 -0.1 -0.1
denitrifying Nitrate reduction, replicate A t2 -1.2 +0.8 +0.4 +0.3 +0.1
carbon source carbon source Sucrose 1mM +1.4 -0.7 -0.0 +0.2 +0.1
stress nitrite 10 mM +1.2 -0.6 +0.1 +0.1 +0.2
stress D-Cycloserine 0.1 mg/ml +1.5 -0.1 -0.3 +0.4 -0.1
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