Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 191 experiments or choose conditions or try the comparative fitness browser

500 ntPf1N1B4_2908 and Pf1N1B4_5209 are separated by 167 nucleotidesPf1N1B4_5209 and Pf1N1B4_2909 are separated by 116 nucleotidesPf1N1B4_2909 and Pf1N1B4_2910 are separated by 324 nucleotidesPf1N1B4_2910 and Pf1N1B4_2911 are separated by 15 nucleotides Pf1N1B4_2908 - Integrase, at 3,263,136 to 3,263,828 _2908 Pf1N1B4_5209 - tRNA-Met-CAT, at 3,263,996 to 3,264,069 _5209 Pf1N1B4_2909 - Methyl-accepting chemotaxis protein, at 3,264,186 to 3,266,243 _2909 Pf1N1B4_2910 - fosmidomycin resistance protein, at 3,266,568 to 3,267,785 _2910 Pf1N1B4_2911 - 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7), at 3,267,801 to 3,268,814 _2911
Group Condition Pf1N1B4_2908 Pf1N1B4_5209 Pf1N1B4_2909 Pf1N1B4_2910 Pf1N1B4_2911
carbon source carbon source Sucrose 5mM -0.1 N.D. -0.3 -0.5 -0.1
phagefrs Time6-FRS -0.2 N.D. -0.3 -0.2 -0.2
temperature LB 37C +0.2 N.D. -0.9 -0.0 +0.0
carbon source L-Arabinose (C) -0.0 N.D. -0.5 -0.2 +0.0
stress sodium fluoride 12.5 mM -0.7 N.D. +0.0 +0.2 -0.1
carbon source D-Mannose (C) -0.2 N.D. -0.5 +0.2 -0.1
carbon source D-Ribose (C) -0.3 N.D. +0.4 -0.2 -0.3
pH Minimal media pH9 -0.0 N.D. +0.4 -0.5 -0.3
carbon source Uridine (C) -0.4 N.D. -0.3 +0.1 +0.1
carbon source carbon source Sucrose 0.25mM +0.2 N.D. -0.5 +0.2 -0.2
stress Dimethyl Sulfoxide 5 vol% -0.2 N.D. -0.4 +0.1 +0.2
stress Doxycycline hyclate 0.0001 mg/ml +0.1 N.D. +0.1 -0.4 -0.2
denitrifying Nitrate reduction, replicate C t3 +0.3 N.D. -0.4 -0.2 +0.1
stress benzoic 0.58 mg/ml +0.1 N.D. +0.2 -0.6 +0.1
temperature LB 30C -0.2 N.D. +0.3 -0.2 -0.1
stress Choline Lysine 6 mM +0.2 N.D. -0.3 -0.2 +0.1
carbon source carbon source Sucrose 0.5mM -0.3 N.D. +0.4 -0.2 -0.1
stress Choline chloride 200 mM +0.0 N.D. -0.5 +0.2 +0.2
carbon source carbon source Sucrose 20mM +0.2 N.D. -0.3 -0.2 +0.2
carbon source D-Gluconic Acid (C) -0.2 N.D. +0.5 -0.3 +0.0
anaerobic Nitrate reduction +0.4 N.D. -0.3 -0.1 +0.1
nitrogen source L-Leucine (N) +0.2 N.D. -0.4 +0.3 +0.1
anaerobic Nitrate reduction +0.6 N.D. -0.5 +0.3 -0.2
nitrogen source nitrogen source nitrite 0.1mM +0.1 N.D. +0.3 +0.3 -0.3
lb LB -0.1 N.D. +0.4 -0.2 +0.3
carbon source carbon source Sucrose 5mM -0.2 N.D. +0.4 +0.2 +0.2
nitrogen source nitrogen source nitrite 0.1mM -0.1 N.D. +0.2 +0.7 -0.2
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 +0.3 N.D. +0.6 -0.3 +0.1
carbon source carbon source Sucrose 0.25mM +0.1 N.D. -0.0 +0.6 +0.1
stress methylglyoxal 0.004 vol% +0.3 N.D. +0.4 -0.1 +0.2
remove
Pf1N1B4_2908
plot		 remove
Pf1N1B4_5209
plot		 remove
Pf1N1B4_2909		 remove
Pf1N1B4_2910
plot		 remove
Pf1N1B4_2911
plot