Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_2881 and Pf1N1B4_2882 are separated by 63 nucleotidesPf1N1B4_2882 and Pf1N1B4_2883 overlap by 1 nucleotidesPf1N1B4_2883 and Pf1N1B4_5204 are separated by 564 nucleotidesPf1N1B4_5204 and Pf1N1B4_5205 are separated by 81 nucleotides Pf1N1B4_2881 - CDP-diacylglycerol--serine O-phosphatidyltransferase (EC 2.7.8.8), at 3,227,895 to 3,228,752 _2881 Pf1N1B4_2882 - Putative sulfite oxidase subunit YedY, at 3,228,816 to 3,229,829 _2882 Pf1N1B4_2883 - FIG001196: Membrane protein YedZ, at 3,229,829 to 3,230,449 _2883 Pf1N1B4_5204 - Small Subunit Ribosomal RNA; ssuRNA; SSU rRNA, at 3,231,014 to 3,232,542 _5204 Pf1N1B4_5205 - tRNA-Ile-GAT, at 3,232,624 to 3,232,697 _5205
Group Condition Pf1N1B4_2881 Pf1N1B4_2882 Pf1N1B4_2883 Pf1N1B4_5204 Pf1N1B4_5205
carbon source octanoate (C) N.D. -1.0 -0.4 N.D. N.D.
pH Minimal media pH9 N.D. -0.8 -0.5 N.D. N.D.
carbon source carbon source Sucrose 0.25mM N.D. -0.5 -0.7 N.D. N.D.
stress Spectinomycin 0.05 mg/ml N.D. -0.6 -0.5 N.D. N.D.
stress nitrate 100 mM N.D. -0.5 -0.4 N.D. N.D.
stress Gentamicin 0.001 mg/ml N.D. -0.5 -0.4 N.D. N.D.
stress Sisomicin 0.001 mg/ml N.D. -0.5 -0.4 N.D. N.D.
stress nitrite 10 mM N.D. -0.5 -0.2 N.D. N.D.
carbon source carbon source Sucrose 1mM N.D. -0.5 -0.2 N.D. N.D.
carbon source Uridine (C) N.D. -0.4 -0.3 N.D. N.D.
stress Chlorite 1 mM N.D. -0.6 -0.1 N.D. N.D.
temperature LB 10C N.D. -0.5 -0.1 N.D. N.D.
stress nitrite 10 mM N.D. -0.4 -0.3 N.D. N.D.
survival 4C survival; 24 hrs N.D. -0.4 -0.2 N.D. N.D.
stress Spectinomycin 0.025 mg/ml N.D. -0.5 -0.1 N.D. N.D.
nitrogen source L-Serine (N) N.D. -0.4 -0.2 N.D. N.D.
lb LB N.D. -0.5 -0.1 N.D. N.D.
pH Minimal media pH8 N.D. -0.3 -0.3 N.D. N.D.
denitrifying Nitrate reduction, replicate C t3 N.D. -0.7 +0.1 N.D. N.D.
stress Thallium(I) acetate 0.008 mg/ml N.D. -0.3 -0.3 N.D. N.D.
carbon source D-Galacturonic Acid (C) N.D. -0.5 -0.1 N.D. N.D.
denitrifying Nitrate reduction, replicate A N.D. -0.6 +0.1 N.D. N.D.
carbon source carbon source Sucrose 0.25mM N.D. +0.3 -0.7 N.D. N.D.
carbon source L-Leucine (C) N.D. -0.5 +0.1 N.D. N.D.
stress Benzethonium chloride 0.0125 mM N.D. -0.5 +0.2 N.D. N.D.
temperature LB 37C N.D. -0.4 +0.2 N.D. N.D.
denitrifying Nitrate reduction, replicate C N.D. -0.4 +0.3 N.D. N.D.
stress Doxycycline hyclate 0.0001 mg/ml N.D. -0.1 +0.4 N.D. N.D.
stress Fusidic 0.0625 mg/ml N.D. +0.4 +0.4 N.D. N.D.
stress Fusidic 0.125 mg/ml N.D. +0.8 +0.7 N.D. N.D.
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