Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N1B4
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 191 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
Pf1N1B4_2871 and Pf1N1B4_2872 are separated by 91 nucleotides
Pf1N1B4_2872 and Pf1N1B4_2873 overlap by 4 nucleotides
Pf1N1B4_2873 and Pf1N1B4_2874 are separated by 24 nucleotides
Pf1N1B4_2874 and Pf1N1B4_2875 are separated by 16 nucleotides
Pf1N1B4_2871 - FIG00954216: hypothetical protein, at 3,218,109 to 3,218,453
_2871
Pf1N1B4_2872 - FIG00955330: hypothetical protein, at 3,218,545 to 3,220,101
_2872
Pf1N1B4_2873 - hypothetical protein, at 3,220,098 to 3,220,244
_2873
Pf1N1B4_2874 - Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-), at 3,220,269 to 3,222,536
_2874
Pf1N1B4_2875 - FOG: TPR repeat, at 3,222,553 to 3,223,287
_2875
Group
Condition
Pf1N1B4
_2871
Pf1N1B4
_2872
Pf1N1B4
_2873
Pf1N1B4
_2874
Pf1N1B4
_2875
nitrogen source
nitrogen source nitrite 0.5mM
-0.2
-0.4
+0.0
-3.7
N.D.
stress
Chlorite 1 mM
-0.7
+0.1
-0.5
-2.9
N.D.
denitrifying
Nitrate reduction, replicate C
+0.1
-1.7
+0.2
-2.7
N.D.
stress
Cisplatin 0.006 mg/ml
-0.4
-0.7
+0.1
-2.7
N.D.
pH
Minimal media pH6
-0.4
-0.2
-0.1
-2.6
N.D.
temperature
LB 37C
-1.0
-0.0
-0.5
-1.6
N.D.
carbon source
carbon source Sucrose 0.25mM
-1.1
-0.5
-1.0
-0.5
N.D.
pH
Minimal media pH8
-0.1
-0.3
-0.3
-2.3
N.D.
carbon source
D-Mannose (C)
-0.5
-0.3
-0.1
-2.0
N.D.
denitrifying
Nitrate reduction, replicate B
+0.1
-1.6
-0.3
-1.1
N.D.
pH
Minimal media pH7
+0.1
-0.3
-0.3
-2.4
N.D.
stress
Rifampicin 0.004 mg/ml
+0.0
-0.3
-0.1
-2.5
N.D.
nitrogen source
L-Leucine (N)
-0.1
-0.4
-0.1
-2.2
N.D.
carbon source
L-Asparagine (C)
-0.2
-0.6
-0.3
-1.6
N.D.
carbon source
D-Trehalose (C)
-0.1
-0.5
-0.2
-2.0
N.D.
carbon source
L-Alanine (C)
+0.3
-0.1
-0.6
-2.2
N.D.
anaerobic
N2E2wt with N1B4m denitrifying repA
-0.5
-1.3
+0.4
-1.0
N.D.
carbon source
L-Histidine (C)
+0.2
+0.1
-0.3
-2.4
N.D.
nitrogen source
L-Arginine (N)
+0.2
-0.5
-0.2
-1.8
N.D.
nitrogen source
nitrogen source nitrite 0.1mM
+0.3
-1.1
-0.1
-1.6
N.D.
nitrogen source
Adenine (N)
+0.9
-0.0
-1.0
-2.0
N.D.
carbon source
Carnitine Hydrochloride (C)
-0.1
+0.4
-0.6
-1.6
N.D.
carbon source
carbon source Sucrose 0.5mM
+0.9
-0.4
-0.9
-1.4
N.D.
anaerobic
Nitrate reduction
+0.7
-0.9
-0.7
-0.8
N.D.
stress
Aluminum chloride 2.5 mM
+0.4
+0.2
-1.1
-1.1
N.D.
carbon source
octanoate (C)
-0.5
+0.5
+0.3
-1.6
N.D.
carbon source
carbon source Sucrose 1mM
+0.8
-0.8
-0.8
-0.4
N.D.
nitrogen source
Uridine (N)
+0.6
+0.3
-1.0
-0.8
N.D.
anaerobic
Nitrate reduction
+1.0
-0.6
-0.4
-0.8
N.D.
carbon source
carbon source Sucrose 1mM
+0.9
-0.4
-1.3
+0.2
N.D.
remove
Pf1N1B4_2871
plot
remove
Pf1N1B4_2872
plot
remove
Pf1N1B4_2873
remove
Pf1N1B4_2874
plot
remove
Pf1N1B4_2875
plot