Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_2871 and Pf1N1B4_2872 are separated by 91 nucleotidesPf1N1B4_2872 and Pf1N1B4_2873 overlap by 4 nucleotidesPf1N1B4_2873 and Pf1N1B4_2874 are separated by 24 nucleotidesPf1N1B4_2874 and Pf1N1B4_2875 are separated by 16 nucleotides Pf1N1B4_2871 - FIG00954216: hypothetical protein, at 3,218,109 to 3,218,453 _2871 Pf1N1B4_2872 - FIG00955330: hypothetical protein, at 3,218,545 to 3,220,101 _2872 Pf1N1B4_2873 - hypothetical protein, at 3,220,098 to 3,220,244 _2873 Pf1N1B4_2874 - Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-), at 3,220,269 to 3,222,536 _2874 Pf1N1B4_2875 - FOG: TPR repeat, at 3,222,553 to 3,223,287 _2875
Group Condition Pf1N1B4_2871 Pf1N1B4_2872 Pf1N1B4_2873 Pf1N1B4_2874 Pf1N1B4_2875
nitrogen source nitrogen source nitrite 0.5mM -0.2 -0.4 +0.0 -3.7 N.D.
stress Chlorite 1 mM -0.7 +0.1 -0.5 -2.9 N.D.
denitrifying Nitrate reduction, replicate C +0.1 -1.7 +0.2 -2.7 N.D.
stress Cisplatin 0.006 mg/ml -0.4 -0.7 +0.1 -2.7 N.D.
pH Minimal media pH6 -0.4 -0.2 -0.1 -2.6 N.D.
temperature LB 37C -1.0 -0.0 -0.5 -1.6 N.D.
carbon source carbon source Sucrose 0.25mM -1.1 -0.5 -1.0 -0.5 N.D.
pH Minimal media pH8 -0.1 -0.3 -0.3 -2.3 N.D.
carbon source D-Mannose (C) -0.5 -0.3 -0.1 -2.0 N.D.
denitrifying Nitrate reduction, replicate B +0.1 -1.6 -0.3 -1.1 N.D.
pH Minimal media pH7 +0.1 -0.3 -0.3 -2.4 N.D.
stress Rifampicin 0.004 mg/ml +0.0 -0.3 -0.1 -2.5 N.D.
nitrogen source L-Leucine (N) -0.1 -0.4 -0.1 -2.2 N.D.
carbon source L-Asparagine (C) -0.2 -0.6 -0.3 -1.6 N.D.
carbon source D-Trehalose (C) -0.1 -0.5 -0.2 -2.0 N.D.
carbon source L-Alanine (C) +0.3 -0.1 -0.6 -2.2 N.D.
anaerobic N2E2wt with N1B4m denitrifying repA -0.5 -1.3 +0.4 -1.0 N.D.
carbon source L-Histidine (C) +0.2 +0.1 -0.3 -2.4 N.D.
nitrogen source L-Arginine (N) +0.2 -0.5 -0.2 -1.8 N.D.
nitrogen source nitrogen source nitrite 0.1mM +0.3 -1.1 -0.1 -1.6 N.D.
nitrogen source Adenine (N) +0.9 -0.0 -1.0 -2.0 N.D.
carbon source Carnitine Hydrochloride (C) -0.1 +0.4 -0.6 -1.6 N.D.
carbon source carbon source Sucrose 0.5mM +0.9 -0.4 -0.9 -1.4 N.D.
anaerobic Nitrate reduction +0.7 -0.9 -0.7 -0.8 N.D.
stress Aluminum chloride 2.5 mM +0.4 +0.2 -1.1 -1.1 N.D.
carbon source octanoate (C) -0.5 +0.5 +0.3 -1.6 N.D.
carbon source carbon source Sucrose 1mM +0.8 -0.8 -0.8 -0.4 N.D.
nitrogen source Uridine (N) +0.6 +0.3 -1.0 -0.8 N.D.
anaerobic Nitrate reduction +1.0 -0.6 -0.4 -0.8 N.D.
carbon source carbon source Sucrose 1mM +0.9 -0.4 -1.3 +0.2 N.D.
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