Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_2857 and Pf1N1B4_2858 are separated by 454 nucleotidesPf1N1B4_2858 and Pf1N1B4_2859 are separated by 22 nucleotidesPf1N1B4_2859 and Pf1N1B4_2860 overlap by 11 nucleotidesPf1N1B4_2860 and Pf1N1B4_2861 are separated by 77 nucleotides Pf1N1B4_2857 - Poly(A) polymerase (EC 2.7.7.19), at 3,204,266 to 3,204,427 _2857 Pf1N1B4_2858 - Two-component sensor CbrB: intrcellular carbon:nitrogen balance, at 3,204,882 to 3,206,318 _2858 Pf1N1B4_2859 - Two-component sensor CbrA: intrcellular carbon:nitrogen balance, at 3,206,341 to 3,209,289 _2859 Pf1N1B4_2860 - FIG00954153: hypothetical protein, at 3,209,279 to 3,209,455 _2860 Pf1N1B4_2861 - glutamyl-Q-tRNA synthetase, at 3,209,533 to 3,210,429 _2861
Group Condition Pf1N1B4_2857 Pf1N1B4_2858 Pf1N1B4_2859 Pf1N1B4_2860 Pf1N1B4_2861
carbon source Carnitine Hydrochloride (C) -0.8 -2.9 -2.4 -3.0 +0.0
carbon source L-Arabinose (C) -1.2 -2.8 -2.7 -1.8 -0.6
carbon source m-Inositol (C) -1.6 -2.4 -2.2 -2.0 -0.3
carbon source L-Arabinose (C) -0.8 -2.8 -2.5 -2.1 -0.2
carbon source L-Histidine (C) -0.1 -2.9 -2.4 -2.8 -0.2
carbon source carbon source Sucrose 5mM -0.6 -3.6 -2.4 -0.4 -0.5
carbon source L-Arginine (C) -0.3 -2.7 -2.4 -2.2 +0.5
carbon source carbon source Sucrose 5mM -1.5 -2.8 -1.7 -0.9 -0.3
carbon source D,L-Lactate (C) -1.1 -3.0 -2.0 -0.9 -0.2
carbon source a-Ketoglutaric (C) -1.1 -3.1 -2.0 -0.8 -0.1
carbon source L-Leucine (C) +0.1 -2.7 -2.3 -2.4 +0.2
carbon source L-Citrulline (C) -0.1 -2.8 -2.3 -2.2 +0.4
carbon source D-Trehalose (C) -0.4 -2.8 -2.2 -1.6 +0.3
carbon source a-Ketoglutaric (C) -0.8 -2.9 -2.0 -0.7 -0.2
carbon source D-Galacturonic Acid (C) -0.5 -2.4 -2.0 -1.8 -0.0
carbon source D-Galactose (C) -0.7 -3.0 -2.1 -0.6 -0.1
carbon source D,L-Lactate (C) -0.5 -2.9 -1.9 -1.0 -0.0
carbon source D-Galactose (C) -0.6 -2.9 -2.1 -0.7 +0.0
carbon source D-Alanine (C) -0.2 -2.6 -2.3 -1.2 +0.1
carbon source L-Isoleucine (C) +0.5 -2.7 -2.0 -1.7 -0.2
carbon source octanoate (C) -0.1 -2.3 -2.1 -1.6 -0.0
nitrogen source nitrogen source nitrate 20mM +0.3 -3.5 -1.7 -0.8 -0.3
carbon source D-Lactate (C) -0.5 -3.1 -1.9 -0.7 +0.2
carbon source carbon source Sucrose 20mM -0.6 -3.1 -2.0 -0.3 +0.3
carbon source Cytidine (C) -0.3 -2.5 -1.8 -1.1 +0.3
carbon source carbon source Sucrose 20mM +0.2 -3.1 -2.2 -0.6 +0.3
denitrifying Nitrate reduction, replicate A -2.1 -0.7 -1.3 -1.4 +0.6
pH Minimal media pH9 -0.8 -2.6 -1.2 +0.7 -0.9
denitrifying Nitrate reduction, replicate B -1.1 -0.9 -1.3 -1.9 +1.0
carbon source carbon source Sucrose 0.25mM +1.2 -2.9 -0.5 +1.4 +0.5
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