Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_2854 and Pf1N1B4_2855 are separated by 371 nucleotidesPf1N1B4_2855 and Pf1N1B4_2856 are separated by 3 nucleotidesPf1N1B4_2856 and Pf1N1B4_2857 are separated by 122 nucleotidesPf1N1B4_2857 and Pf1N1B4_2858 are separated by 454 nucleotides Pf1N1B4_2854 - 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11), at 3,201,082 to 3,201,882 _2854 Pf1N1B4_2855 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase (EC 2.7.6.3), at 3,202,254 to 3,202,739 _2855 Pf1N1B4_2856 - Poly(A) polymerase (EC 2.7.7.19), at 3,202,743 to 3,204,143 _2856 Pf1N1B4_2857 - Poly(A) polymerase (EC 2.7.7.19), at 3,204,266 to 3,204,427 _2857 Pf1N1B4_2858 - Two-component sensor CbrB: intrcellular carbon:nitrogen balance, at 3,204,882 to 3,206,318 _2858
Group Condition Pf1N1B4_2854 Pf1N1B4_2855 Pf1N1B4_2856 Pf1N1B4_2857 Pf1N1B4_2858
carbon source octanoate (C) -2.4 N.D. -1.6 -0.1 -2.3
carbon source L-Arabinose (C) -1.1 N.D. -0.9 -1.2 -2.8
pH Minimal media pH9 -2.8 N.D. +0.5 -0.8 -2.6
carbon source L-Lactate (C) -0.5 N.D. -1.6 -0.7 -2.8
carbon source carbon source Sucrose 5mM -1.9 N.D. +0.8 -1.5 -2.8
carbon source carbon source Sucrose 1mM -3.5 N.D. +0.9 -0.1 -2.7
carbon source carbon source Sucrose 0.25mM -3.7 N.D. +0.1 +1.2 -2.9
carbon source L-Arabinose (C) -0.9 N.D. -0.7 -0.8 -2.8
carbon source D,L-Lactate (C) -0.4 N.D. -0.8 -1.1 -3.0
carbon source L-Arginine (C) -1.8 N.D. -0.5 -0.3 -2.7
carbon source carbon source Sucrose 1mM -2.4 N.D. -0.3 +0.7 -3.2
carbon source carbon source Sucrose 0.25mM -2.7 N.D. -0.0 +0.8 -3.0
carbon source carbon source Sucrose 0.5mM -2.8 N.D. +0.3 +0.8 -3.1
carbon source D-Galactose (C) -0.7 N.D. -0.5 -0.7 -3.0
carbon source D-Gluconic Acid (C) -0.6 N.D. -1.0 -0.5 -2.7
carbon source D-Fructose (C) -0.4 N.D. -0.5 -1.4 -2.2
carbon source carbon source Sucrose 20mM -1.0 N.D. +0.1 -0.6 -3.1
carbon source carbon source Sucrose 5mM -0.4 N.D. +0.1 -0.6 -3.6
nitrogen source L-Serine (N) +0.4 N.D. -1.0 -0.9 -2.5
carbon source D-Lactate (C) +0.6 N.D. -0.9 -0.5 -3.1
carbon source D-Lactate (C) +0.6 N.D. -0.8 -0.6 -2.9
pH Minimal media pH9 -1.8 N.D. +1.1 -0.1 -2.8
carbon source m-Inositol (C) +0.6 N.D. -0.2 -1.6 -2.4
nitrogen source nitrogen source nitrite 0.1mM +0.2 N.D. +0.5 -1.1 -3.0
nitrogen source L-Isoleucine (N) -1.5 N.D. +0.9 -0.3 -2.3
nitrogen source nitrogen source nitrate 20mM -0.7 N.D. +0.8 +0.3 -3.5
carbon source Carnitine Hydrochloride (C) +0.8 N.D. +0.4 -0.8 -2.9
stress Rifampicin 0.004 mg/ml +0.8 N.D. -3.1 +0.3 +0.8
stress Benzethonium chloride 0.0125 mM +1.1 N.D. -2.9 +0.2 +1.0
stress Doxycycline hyclate 0.0001 mg/ml +1.8 N.D. -2.1 -0.0 +1.3
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