Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_2728 and Pf1N1B4_2729 are separated by 141 nucleotidesPf1N1B4_2729 and Pf1N1B4_2730 are separated by 88 nucleotidesPf1N1B4_2730 and Pf1N1B4_2731 are separated by 178 nucleotidesPf1N1B4_2731 and Pf1N1B4_2732 are separated by 142 nucleotides Pf1N1B4_2728 - ATP-dependent helicase HrpB, at 3,065,847 to 3,068,363 _2728 Pf1N1B4_2729 - endonuclease/exonuclease/phosphatase family protein, at 3,068,505 to 3,069,587 _2729 Pf1N1B4_2730 - FIG00958173: hypothetical protein, at 3,069,676 to 3,070,350 _2730 Pf1N1B4_2731 - Uncharacterized protein conserved in bacteria, at 3,070,529 to 3,071,281 _2731 Pf1N1B4_2732 - FIG00954572: hypothetical protein, at 3,071,424 to 3,071,903 _2732
Group Condition Pf1N1B4_2728 Pf1N1B4_2729 Pf1N1B4_2730 Pf1N1B4_2731 Pf1N1B4_2732
stress D-Cycloserine 0.1 mg/ml -0.1 -0.6 -0.2 -0.5 -0.4
temperature LB 37C -0.6 -0.4 +0.0 -0.6 +0.2
nitrogen source Thymine (N) -0.3 -0.3 +0.2 -1.1 -0.1
nitrogen source Cytidine (N) +0.0 -0.5 +0.1 -0.8 -0.0
stress Benzethonium chloride 0.0125 mM -0.4 -0.0 +0.2 -0.3 -0.5
carbon source carbon source Sucrose 1mM +0.2 -0.2 -0.1 +0.0 -0.9
stress Sisomicin 0.001 mg/ml -0.1 +0.3 -0.0 -1.3 +0.2
nitrogen source Carnitine Hydrochloride (N) -0.4 -0.1 +0.4 -0.7 -0.0
nitrogen source Ammonium chloride (N) +0.1 -0.6 -0.1 -0.4 +0.2
carbon source carbon source Sucrose 0.5mM +0.3 +0.1 -0.4 -0.2 -0.6
temperature LB 37C +0.2 -0.5 -0.1 -0.5 +0.3
stress Cholin acetate 10 mM +0.1 -0.0 +0.3 -1.0 +0.2
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A +0.3 -0.2 +0.1 -0.5 +0.1
stress Dimethyl Sulfoxide 5 vol% +0.2 -0.4 +0.1 -0.4 +0.4
nitrogen source nitrogen source Ammonium chloride 20mM -0.4 +0.1 +0.1 +0.8 -0.6
anaerobic Nitrate reduction +0.4 +0.5 -0.5 +0.0 -0.3
lb LB -0.0 -0.4 +0.2 +0.7 -0.2
stress Cisplatin 0.006 mg/ml +0.1 -0.0 +0.3 +0.6 -0.7
carbon source carbon source Sucrose 0.25mM -0.1 +0.6 -0.1 +0.6 -0.7
nitrogen source D-Glucosamine Hydrochloride (N) +0.1 -0.5 +0.3 +0.5 +0.2
denitrifying Nitrate reduction, replicate C t1 +0.3 -0.3 -0.2 +0.4 +0.4
stress Cholin acetate 20 mM +0.5 +0.2 -0.2 +0.6 -0.3
stress Cisplatin 0.006 mg/ml -0.2 +0.2 -0.1 +1.0 -0.1
pH Minimal media pH9 -0.2 +0.2 +0.1 +0.7 +0.4
stress sodium fluoride 12.5 mM +0.5 +0.1 -0.0 +0.6 +0.2
nitrogen source L-Methionine (N) +0.4 +0.0 +0.3 +0.6 -0.0
anaerobic N2E2wt with N1B4m denitrifying repA +0.3 +0.4 -0.1 +0.6 +0.1
stress Carbenicillin 2 mg/ml -0.1 +0.1 +0.1 +0.9 +0.5
carbon source Carnitine Hydrochloride (C) +0.0 -0.1 +1.1 +0.0 +0.4
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 -0.3 +0.4 +0.6 +0.9 +0.0
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