Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_2657 and Pf1N1B4_2658 overlap by 4 nucleotidesPf1N1B4_2658 and Pf1N1B4_2659 overlap by 1 nucleotidesPf1N1B4_2659 and Pf1N1B4_2660 are separated by 108 nucleotidesPf1N1B4_2660 and Pf1N1B4_2661 are separated by 159 nucleotides Pf1N1B4_2657 - GTP cyclohydrolase II (EC 3.5.4.25), at 2,993,243 to 2,993,860 _2657 Pf1N1B4_2658 - Permeases of the major facilitator superfamily, at 2,993,857 to 2,994,276 _2658 Pf1N1B4_2659 - Vitamin B12 ABC transporter, B12-binding component BtuF, at 2,994,276 to 2,995,076 _2659 Pf1N1B4_2660 - Outer membrane vitamin B12 receptor BtuB, at 2,995,185 to 2,997,068 _2660 Pf1N1B4_2661 - 1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7), at 2,997,228 to 2,999,126 _2661
Group Condition Pf1N1B4_2657 Pf1N1B4_2658 Pf1N1B4_2659 Pf1N1B4_2660 Pf1N1B4_2661
denitrifying Nitrate reduction, replicate C t3 N.D. N.D. -0.9 -0.8 N.D.
denitrifying Nitrate reduction, replicate A t2 N.D. N.D. -0.6 -0.7 N.D.
denitrifying Nitrate reduction, replicate A t1 N.D. N.D. -0.4 -0.6 N.D.
denitrifying Nitrate reduction, replicate C t1 N.D. N.D. -0.4 -0.6 N.D.
denitrifying Nitrate reduction, replicate C t2 N.D. N.D. -0.4 -0.5 N.D.
stress Benzethonium chloride 0.0125 mM N.D. N.D. -0.4 -0.4 N.D.
denitrifying Nitrate reduction, replicate B N.D. N.D. -0.4 -0.4 N.D.
temperature LB 37C N.D. N.D. -0.3 -0.4 N.D.
denitrifying Nitrate reduction, replicate C N.D. N.D. -0.6 -0.1 N.D.
carbon source carbon source Sucrose 0.25mM N.D. N.D. -0.5 -0.1 N.D.
carbon source carbon source Sucrose 1mM N.D. N.D. -0.6 +0.3 N.D.
carbon source D-Galactose (C) N.D. N.D. -0.3 +0.1 N.D.
carbon source carbon source Sucrose 5mM N.D. N.D. -0.4 +0.2 N.D.
carbon source Cytidine (C) N.D. N.D. -0.3 +0.2 N.D.
carbon source octanoate (C) N.D. N.D. -0.3 +0.2 N.D.
stress Thallium(I) acetate 0.008 mg/ml N.D. N.D. -0.3 +0.2 N.D.
pH Minimal media pH9 N.D. N.D. +0.2 -0.2 N.D.
carbon source L-Isoleucine (C) N.D. N.D. -0.3 +0.2 N.D.
stress Cisplatin 0.006 mg/ml N.D. N.D. -0.2 +0.3 N.D.
nitrogen source nitrogen source nitrate 5mM N.D. N.D. -0.2 +0.3 N.D.
stress Nalidixic 0.004 mg/ml N.D. N.D. +0.3 -0.1 N.D.
stress copper (II) chloride 2.5 mM N.D. N.D. -0.1 +0.3 N.D.
carbon source L-Arabinose (C) N.D. N.D. +0.4 -0.1 N.D.
nitrogen source nitrogen source nitrite 0.1mM N.D. N.D. +0.1 +0.3 N.D.
carbon source pyruvate (C) N.D. N.D. +0.2 +0.3 N.D.
stress Cobalt chloride 0.3125 mM N.D. N.D. +0.3 +0.2 N.D.
stress Paraquat dichloride 0.016 mg/mL N.D. N.D. +0.1 +0.3 N.D.
carbon source carbon source Sucrose 0.25mM N.D. N.D. +0.8 -0.2 N.D.
carbon source carbon source Sucrose 1mM N.D. N.D. +0.5 +0.1 N.D.
carbon source carbon source Sucrose 5mM N.D. N.D. +0.3 +0.4 N.D.
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