Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N1B4
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 191 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
Pf1N1B4_2552 and Pf1N1B4_2553 are separated by 173 nucleotides
Pf1N1B4_2553 and Pf1N1B4_2554 are separated by 184 nucleotides
Pf1N1B4_2554 and Pf1N1B4_2555 are separated by 82 nucleotides
Pf1N1B4_2555 and Pf1N1B4_2556 are separated by 50 nucleotides
Pf1N1B4_2552 - OsmC/Ohr family protein, at 2,895,574 to 2,895,996
_2552
Pf1N1B4_2553 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-), at 2,896,170 to 2,896,817
_2553
Pf1N1B4_2554 - Bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) (EC 3.6.1.17), at 2,897,002 to 2,897,340
_2554
Pf1N1B4_2555 - Oxidoreductase, short chain dehydrogenase/reductase family, at 2,897,423 to 2,898,223
_2555
Pf1N1B4_2556 - FIG00954311: hypothetical protein, at 2,898,274 to 2,899,251
_2556
Group
Condition
Pf1N1B4
_2552
Pf1N1B4
_2553
Pf1N1B4
_2554
Pf1N1B4
_2555
Pf1N1B4
_2556
carbon source
acetate (C)
-0.0
N.D.
-2.4
-0.2
-0.0
carbon source
acetate (C)
+0.0
N.D.
-2.5
-0.1
+0.0
carbon source
pyruvate (C)
-1.3
N.D.
-0.4
-0.1
-0.2
carbon source
D-Glucose (C)
-1.6
N.D.
-0.0
-0.3
-0.1
carbon source
L-Arabinose (C)
-1.0
N.D.
-0.7
-0.1
+0.0
stress
Thallium(I) acetate 0.008 mg/ml
-1.1
N.D.
-0.1
-0.2
-0.3
stress
sodium fluoride 12.5 mM
-1.5
N.D.
-0.0
-0.1
-0.1
nitrogen source
Carnitine Hydrochloride (N)
-0.6
N.D.
-0.6
-0.2
-0.2
lb
LB
-1.0
N.D.
-0.2
-0.0
-0.2
stress
Thallium(I) acetate 0.008 mg/ml
-0.8
N.D.
-0.3
-0.1
-0.2
carbon source
L-Lactate (C)
-1.0
N.D.
-0.4
-0.2
+0.2
carbon source
carbon source Sucrose 5mM
-1.6
N.D.
-0.0
-0.3
+0.5
stress
nitrite 10 mM
-0.1
N.D.
-0.5
-0.6
-0.3
denitrifying
Nitrate reduction, replicate C
-0.9
N.D.
-0.2
-0.5
+0.2
stress
Cisplatin 0.006 mg/ml
-1.0
N.D.
+0.1
-0.1
-0.3
lb
LB
-0.9
N.D.
+0.0
-0.3
-0.2
stress
Cisplatin 0.006 mg/ml
-1.0
N.D.
+0.2
-0.4
-0.1
carbon source
L-Arabinose (C)
-1.0
N.D.
-0.2
+0.2
-0.2
carbon source
octanoate (C)
+0.3
N.D.
-0.6
-0.7
-0.0
stress
Sisomicin 0.001 mg/ml
-0.9
N.D.
+0.4
-0.4
-0.1
denitrifying
Nitrate reduction, replicate B
-0.9
N.D.
+0.2
-0.3
+0.1
stress
Doxycycline hyclate 0.0001 mg/ml
+0.7
N.D.
-0.5
-0.6
-0.1
carbon source
carbon source Sucrose 5mM
+0.5
N.D.
-0.1
-0.5
-0.3
denitrifying
Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1
+0.6
N.D.
-0.4
-0.2
+0.5
nitrogen source
Adenine (N)
+0.6
N.D.
-0.5
-0.1
+0.4
nitrogen source
Uridine (N)
+0.8
N.D.
-0.7
+0.2
+0.2
nitrogen source
Cytosine (N)
+0.7
N.D.
-0.3
-0.1
+0.3
carbon source
carbon source Sucrose 0.25mM
+0.3
N.D.
+0.4
+0.3
-0.3
temperature
LB 37C
+0.1
N.D.
+0.5
+0.3
+0.5
carbon source
carbon source Sucrose 0.25mM
+1.1
N.D.
+0.1
+0.4
+0.1
remove
Pf1N1B4_2552
plot
remove
Pf1N1B4_2553
plot
remove
Pf1N1B4_2554
remove
Pf1N1B4_2555
plot
remove
Pf1N1B4_2556
plot