Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_2521 and Pf1N1B4_2522 overlap by 4 nucleotidesPf1N1B4_2522 and Pf1N1B4_2523 are separated by 202 nucleotidesPf1N1B4_2523 and Pf1N1B4_2524 overlap by 24 nucleotidesPf1N1B4_2524 and Pf1N1B4_2525 are separated by 189 nucleotides Pf1N1B4_2521 - FIG004684: SpoVR-like protein, at 2,859,636 to 2,861,198 _2521 Pf1N1B4_2522 - FIG002076: hypothetical protein, at 2,861,195 to 2,862,466 _2522 Pf1N1B4_2523 - Serine protein kinase (prkA protein), P-loop containing, at 2,862,669 to 2,864,591 _2523 Pf1N1B4_2524 - hypothetical protein, at 2,864,568 to 2,864,699 _2524 Pf1N1B4_2525 - Thiosulfate sulfurtransferase GlpE (EC 2.8.1.1), at 2,864,889 to 2,865,218 _2525
Group Condition Pf1N1B4_2521 Pf1N1B4_2522 Pf1N1B4_2523 Pf1N1B4_2524 Pf1N1B4_2525
carbon source carbon source Sucrose 1mM -1.9 -1.5 -1.5 N.D. -0.0
carbon source carbon source Sucrose 1mM -1.5 -2.2 -1.5 N.D. +0.5
carbon source carbon source Sucrose 0.5mM -1.6 -0.8 -1.5 N.D. -0.0
carbon source carbon source Sucrose 0.25mM -1.1 -0.5 -1.3 N.D. +0.2
carbon source carbon source Sucrose 0.25mM -0.7 -0.9 -0.4 N.D. +0.2
carbon source L-Leucine (C) -0.5 -0.5 -0.3 N.D. -0.1
carbon source L-Citrulline (C) -0.5 -0.5 -0.3 N.D. +0.0
carbon source L-Isoleucine (C) -0.4 -0.5 -0.4 N.D. -0.1
carbon source Uridine (C) -0.5 -0.4 -0.3 N.D. -0.1
carbon source Carnitine Hydrochloride (C) -0.5 -0.5 -0.2 N.D. +0.1
nitrogen source Cytidine (N) -0.1 -0.1 -0.1 N.D. -1.0
carbon source L-Arginine (C) -0.4 -0.5 -0.2 N.D. -0.1
carbon source Tween 20 (C) -0.5 -0.2 -0.3 N.D. -0.1
nitrogen source nitrogen source nitrite 0.1mM -0.3 -0.6 -0.3 N.D. +0.2
carbon source Cytidine (C) -0.4 -0.2 -0.4 N.D. +0.1
nitrogen source Carnitine Hydrochloride (N) -0.4 -0.5 -0.2 N.D. +0.1
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1 -0.2 -0.0 -0.4 N.D. -0.3
nitrogen source D-Glucosamine Hydrochloride (N) -0.3 -0.2 -0.4 N.D. +0.1
nitrogen source L-Methionine (N) -0.1 +0.2 -0.0 N.D. -0.9
nitrogen source nitrogen source nitrite 0.5mM -0.4 -0.3 -0.1 N.D. +0.1
stress Benzethonium chloride 0.0125 mM +0.1 -0.2 -0.2 N.D. -0.4
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 -0.3 +0.3 -0.2 N.D. -0.3
carbon source carbon source Sucrose 5mM -0.1 -0.3 -0.5 N.D. +0.3
carbon source D-Lactate (C) +0.1 +0.1 +0.0 N.D. -0.6
anaerobic Nitrate reduction -0.1 +0.3 +0.2 N.D. -0.3
pH Minimal media pH9 +0.2 +0.2 -0.1 N.D. +0.4
carbon source Fumarate (C) +0.3 +0.3 +0.4 N.D. -0.1
carbon source pyruvate (C) +0.3 +0.6 +0.3 N.D. -0.2
carbon source Fumarate (C) +0.3 +0.3 +0.4 N.D. +0.0
carbon source D-Fructose (C) +0.3 +0.5 +0.4 N.D. +0.0
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