Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_2466 and Pf1N1B4_2467 are separated by 1 nucleotidesPf1N1B4_2467 and Pf1N1B4_2468 are separated by 236 nucleotidesPf1N1B4_2468 and Pf1N1B4_2469 are separated by 213 nucleotidesPf1N1B4_2469 and Pf1N1B4_2470 are separated by 157 nucleotides Pf1N1B4_2466 - Two-component response regulator CreC, at 2,795,973 to 2,797,406 _2466 Pf1N1B4_2467 - Acetyltransferase, at 2,797,408 to 2,798,418 _2467 Pf1N1B4_2468 - Inner membrane protein CreD, at 2,798,655 to 2,800,025 _2468 Pf1N1B4_2469 - Glutathione S-transferase family protein, at 2,800,239 to 2,800,904 _2469 Pf1N1B4_2470 - FIG00953361: hypothetical protein, at 2,801,062 to 2,801,241 _2470
Group Condition Pf1N1B4_2466 Pf1N1B4_2467 Pf1N1B4_2468 Pf1N1B4_2469 Pf1N1B4_2470
nitrogen source D-Glucosamine Hydrochloride (N) -0.2 -0.1 -0.1 -1.1 N.D.
temperature LB 37C -0.4 -0.4 -0.2 -0.3 N.D.
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1 -0.1 +0.1 -0.3 -0.9 N.D.
nitrogen source nitrate (N) -0.1 -0.0 -0.1 -0.9 N.D.
nitrogen source Carnitine Hydrochloride (N) +0.2 -0.3 -0.1 -0.9 N.D.
nitrogen source nitrogen source nitrate 20mM -0.1 -0.4 +0.3 -0.9 N.D.
nitrogen source Cytidine (N) +0.1 -0.1 -0.2 -0.8 N.D.
carbon source L-Histidine (C) -0.2 -0.3 -0.3 -0.2 N.D.
stress Fusidic 0.125 mg/ml -0.4 +0.1 -0.1 -0.4 N.D.
carbon source carbon source Sucrose 5mM +0.0 +0.4 -0.1 -1.2 N.D.
anaerobic N2E2wt with N1B4m denitrifying repB +0.0 -0.1 +0.1 -0.9 N.D.
pH Minimal media pH9 -0.3 +0.1 +0.0 -0.6 N.D.
stress Bacitracin 2 mg/ml +0.3 -0.3 -0.1 -0.4 N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A +0.1 +0.0 +0.1 -0.8 N.D.
stress methylglyoxal 0.004 vol% +0.1 -0.0 +0.1 -0.6 N.D.
carbon source carbon source Sucrose 5mM -0.1 +0.3 -0.2 -0.4 N.D.
stress Carbenicillin 2 mg/ml +0.3 -0.1 +0.2 -0.5 N.D.
stress Choline Lysine 6 mM +0.3 +0.1 -0.5 +0.2 N.D.
stress Rifampicin 0.004 mg/ml +0.1 -0.3 -0.1 +0.5 N.D.
carbon source carbon source Sucrose 0.25mM +0.1 +0.1 +0.5 -0.4 N.D.
stress Benzethonium chloride 0.0125 mM +0.3 -0.1 -0.3 +0.6 N.D.
stress Spectinomycin 0.025 mg/ml +0.3 -0.1 -0.1 +0.5 N.D.
carbon source D-Lactate (C) -0.1 +0.1 +0.4 +0.3 N.D.
stress Chloride 300 mM -0.0 -0.1 +0.2 +0.6 N.D.
anaerobic N2E2wt with N1B4m denitrifying repA +0.2 -0.1 +0.1 +0.6 N.D.
carbon source carbon source Sucrose 1mM -0.3 +0.1 +0.3 +0.8 N.D.
anaerobic Nitrate reduction -0.1 +0.2 +0.0 +0.8 N.D.
carbon source carbon source Sucrose 1mM +0.2 +0.5 -0.3 +0.5 N.D.
denitrifying Nitrate reduction, replicate C -0.0 +0.3 +0.3 +0.5 N.D.
nitrogen source nitrogen source Ammonium chloride 20mM +0.2 +0.1 +0.1 +0.6 N.D.
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