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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N1B4
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Pf1N1B4_2465 and Pf1N1B4_2466 overlap by 1 nucleotides
Pf1N1B4_2466 and Pf1N1B4_2467 are separated by 1 nucleotides
Pf1N1B4_2467 and Pf1N1B4_2468 are separated by 236 nucleotides
Pf1N1B4_2468 and Pf1N1B4_2469 are separated by 213 nucleotides
Pf1N1B4_2465 - Two-component response regulator CreB, at 2,795,293 to 2,795,973
_2465
Pf1N1B4_2466 - Two-component response regulator CreC, at 2,795,973 to 2,797,406
_2466
Pf1N1B4_2467 - Acetyltransferase, at 2,797,408 to 2,798,418
_2467
Pf1N1B4_2468 - Inner membrane protein CreD, at 2,798,655 to 2,800,025
_2468
Pf1N1B4_2469 - Glutathione S-transferase family protein, at 2,800,239 to 2,800,904
_2469
Group
Condition
Pf1N1B4
_2465
Pf1N1B4
_2466
Pf1N1B4
_2467
Pf1N1B4
_2468
Pf1N1B4
_2469
nitrogen source
D-Glucosamine Hydrochloride (N)
-1.1
-0.2
-0.1
-0.1
-1.1
nitrogen source
nitrate (N)
-0.9
-0.1
-0.0
-0.1
-0.9
nitrogen source
Cytosine (N)
-2.0
-0.0
+0.1
+0.0
-0.2
carbon source
Fumarate (C)
-1.4
-0.1
-0.2
+0.0
-0.2
nitrogen source
Thymine (N)
-1.2
+0.1
-0.2
-0.1
-0.4
nitrogen source
Adenine (N)
-1.6
+0.0
-0.1
-0.1
-0.0
stress
nitrite 10 mM
-1.2
+0.0
-0.1
-0.1
-0.2
nitrogen source
nitrogen source nitrate 20mM
-0.5
-0.1
-0.4
+0.3
-0.9
carbon source
D-Fructose (C)
-1.1
-0.3
+0.1
+0.1
-0.3
denitrifying
Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A
-0.9
+0.1
+0.0
+0.1
-0.8
nitrogen source
Uridine (N)
-0.9
-0.0
+0.1
+0.0
-0.6
stress
Chloride 200 mM
-1.9
+0.2
-0.0
+0.2
+0.2
carbon source
octanoate (C)
-1.1
-0.1
-0.1
-0.1
+0.3
nophagecontrol
Time16-nophage
-1.1
-0.1
-0.1
+0.1
+0.3
carbon source
carbon source Sucrose 5mM
-0.0
+0.0
+0.4
-0.1
-1.2
carbon source
carbon source Sucrose 0.25mM
-1.1
+0.1
+0.1
+0.5
-0.4
nitrogen source
Carnitine Hydrochloride (N)
+0.5
+0.2
-0.3
-0.1
-0.9
stress
Thallium(I) acetate 0.008 mg/ml
-1.1
+0.2
+0.0
+0.1
+0.2
stress
Choline Lysine 6 mM
-0.6
+0.3
+0.1
-0.5
+0.2
nophagecontrol
Time16-nophage
-1.2
+0.0
+0.0
+0.1
+0.6
temperature
LB 37C
+1.0
-0.4
-0.4
-0.2
-0.3
carbon source
carbon source Sucrose 1mM
-1.2
+0.2
+0.5
-0.3
+0.5
stress
Benzethonium chloride 0.0125 mM
-0.6
+0.3
-0.1
-0.3
+0.6
stress
Chloride 300 mM
-0.7
-0.0
-0.1
+0.2
+0.6
anaerobic
Nitrate reduction
-0.9
-0.1
+0.2
+0.0
+0.8
nitrogen source
nitrogen source Ammonium chloride 20mM
-0.8
+0.2
+0.1
+0.1
+0.6
denitrifying
Nitrate reduction, replicate C
-0.7
-0.0
+0.3
+0.3
+0.5
stress
Rifampicin 0.004 mg/ml
+0.6
+0.1
-0.3
-0.1
+0.5
anaerobic
N2E2wt with N1B4m denitrifying repA
+0.7
+0.2
-0.1
+0.1
+0.6
carbon source
carbon source Sucrose 1mM
+0.7
-0.3
+0.1
+0.3
+0.8
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