Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_2440 and Pf1N1B4_2441 overlap by 1 nucleotidesPf1N1B4_2441 and Pf1N1B4_2442 are separated by 15 nucleotidesPf1N1B4_2442 and Pf1N1B4_2443 are separated by 188 nucleotidesPf1N1B4_2443 and Pf1N1B4_2444 are separated by 1136 nucleotides Pf1N1B4_2440 - Predicted L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit YkgF, at 2,764,157 to 2,766,106 _2440 Pf1N1B4_2441 - Electron transfer flavoprotein, alpha subunit, at 2,766,106 to 2,767,326 _2441 Pf1N1B4_2442 - Electron transfer flavoprotein, beta subunit, at 2,767,342 to 2,768,112 _2442 Pf1N1B4_2443 - acetyltransferase, GNAT family, at 2,768,301 to 2,768,867 _2443 Pf1N1B4_2444 - Cholesterol oxidase (EC 1.1.3.6), at 2,770,004 to 2,773,462 _2444
Group Condition Pf1N1B4_2440 Pf1N1B4_2441 Pf1N1B4_2442 Pf1N1B4_2443 Pf1N1B4_2444
carbon source Carnitine Hydrochloride (C) -3.0 -3.3 -1.3 +0.2 +0.2
nitrogen source Carnitine Hydrochloride (N) -2.8 -1.6 -1.5 +0.4 +0.1
carbon source carbon source Sucrose 1mM -0.1 -0.2 -1.0 -0.2 -0.1
nitrogen source nitrogen source nitrate 20mM +0.1 -1.3 -0.2 +0.1 -0.1
stress Chlorite 1 mM -0.0 -0.1 -1.0 -0.5 +0.1
carbon source D-Gluconic Acid (C) +0.2 -0.6 -0.4 -0.5 -0.1
denitrifying Nitrate reduction, replicate C -0.0 -0.9 -0.5 +0.2 -0.0
anaerobic Nitrate reduction +0.2 -0.2 -1.0 -0.2 +0.0
carbon source D-Glucose (C) -0.6 +0.1 -0.5 -0.2 +0.2
nitrogen source nitrogen source nitrite 0.5mM -0.0 -0.2 +0.3 +0.6 -1.5
stress Choline chloride 200 mM -0.1 +0.5 -0.6 -0.6 -0.1
pH Minimal media pH9 +0.1 -0.1 -1.1 +0.4 +0.1
carbon source carbon source Sucrose 20mM -0.1 -0.7 -0.3 +0.4 +0.0
nitrogen source nitrogen source nitrite 0.1mM -0.2 -0.7 +0.7 -0.2 -0.0
carbon source carbon source Sucrose 0.25mM -0.6 -0.3 +0.1 +0.6 -0.2
nitrogen source nitrogen source nitrite 0.5mM -0.0 -0.4 +0.5 +0.4 -0.5
nitrogen source nitrogen source nitrite 0.1mM +0.1 -0.6 +0.8 -0.1 -0.0
temperature LB 37C +0.2 +0.8 -0.5 -0.2 +0.2
carbon source carbon source Sucrose 1mM -0.5 -0.1 +0.5 +0.6 -0.0
nitrogen source D-Alanine (N) -0.6 -0.2 +0.8 +0.4 +0.2
stress Spectinomycin 0.05 mg/ml +0.4 -0.1 +0.6 -0.3 +0.2
carbon source L-Arginine (C) -0.3 +0.2 +0.9 +0.1 +0.1
carbon source Cytidine (C) -0.3 +0.2 +0.9 +0.2 +0.2
carbon source D-Galacturonic Acid (C) -0.2 +0.3 +1.0 +0.0 +0.1
stress D-Cycloserine 0.1 mg/ml -0.2 +0.3 +1.2 -0.0 -0.0
carbon source D-Alanine (C) -0.2 +0.2 +1.0 +0.2 +0.2
carbon source L-Asparagine (C) -0.3 +0.2 +1.2 +0.1 +0.2
carbon source L-Isoleucine (C) -0.3 +0.6 +1.1 +0.1 +0.2
stress Fusidic 0.125 mg/ml +0.2 +1.0 +0.8 -0.1 +0.1
nitrogen source L-Serine (N) +1.0 +1.0 +0.6 -0.1 +0.0
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