Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_2366 and Pf1N1B4_2367 overlap by 4 nucleotidesPf1N1B4_2367 and Pf1N1B4_2368 are separated by 66 nucleotidesPf1N1B4_2368 and Pf1N1B4_2369 are separated by 1 nucleotidesPf1N1B4_2369 and Pf1N1B4_2370 are separated by 106 nucleotides Pf1N1B4_2366 - Phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.-), at 2,683,026 to 2,683,643 _2366 Pf1N1B4_2367 - Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39), at 2,683,640 to 2,684,551 _2367 Pf1N1B4_2368 - Malonate transporter, MadL subunit, at 2,684,618 to 2,685,034 _2368 Pf1N1B4_2369 - Malonate transporter, MadM subunit, at 2,685,036 to 2,685,800 _2369 Pf1N1B4_2370 - Malonate utilization transcriptional regulator, at 2,685,907 to 2,686,827 _2370
Group Condition Pf1N1B4_2366 Pf1N1B4_2367 Pf1N1B4_2368 Pf1N1B4_2369 Pf1N1B4_2370
carbon source carbon source Sucrose 0.25mM -0.7 +0.6 +0.8 -1.7 -1.4
carbon source D-Lactate (C) -1.2 -0.4 -0.4 -0.3 +0.2
carbon source L-Arabinose (C) -0.9 -0.1 -0.4 -0.2 -0.2
carbon source carbon source Sucrose 5mM -0.4 -0.2 -1.2 -0.4 +0.5
carbon source D-Fructose (C) -1.0 -0.1 -0.3 -0.1 +0.3
carbon source D-Lactate (C) -0.1 -0.5 -0.3 -0.7 +0.4
stress copper (II) chloride 2.5 mM +0.3 -0.3 -1.0 +0.1 -0.2
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 -0.9 +0.0 +0.4 -0.5 -0.3
stress nitrate 100 mM -0.7 -0.1 -0.6 +0.3 -0.1
carbon source Fumarate (C) -0.8 -0.2 -0.4 +0.1 +0.3
stress Aluminum chloride 2.5 mM -0.8 -0.1 +0.2 +0.2 -0.6
carbon source D-Glucose (C) -0.1 -0.2 -1.1 +0.3 +0.3
nitrogen source nitrogen source nitrate 20mM -0.1 -0.6 +0.6 -0.7 -0.0
stress Cobalt chloride 0.3125 mM +0.6 -0.4 -0.6 -0.3 +0.1
stress Chloride 200 mM -0.9 +0.6 -0.2 +0.1 +0.1
carbon source D-Glucose (C) -0.3 -0.2 -0.8 +0.6 +0.4
carbon source carbon source Sucrose 1mM -0.7 -0.5 +0.1 +0.6 +0.2
stress methylglyoxal 0.004 vol% +0.4 +0.3 -0.3 -0.5 +0.3
anaerobic Nitrate reduction +1.3 +0.2 -0.9 -0.3 -0.1
nitrogen source Uridine (N) +0.2 +0.1 -1.0 +0.8 +0.1
carbon source carbon source Sucrose 5mM -1.1 -0.9 +1.2 +0.2 +0.8
anaerobic N2E2wt with N1B4m denitrifying repB +0.7 +0.2 -0.6 -0.1 +0.3
nitrogen source nitrogen source nitrite 1mM +0.0 -0.5 +0.6 +0.6 -0.0
stress 1-ethyl-3-methylimidazolium lysine 5 mM +0.1 +0.5 -0.6 +0.1 +0.6
anaerobic Nitrate reduction +1.0 +0.7 -0.0 -0.6 -0.3
nitrogen source Thymine (N) -0.4 +0.4 -0.2 +0.3 +0.7
stress Fusidic 0.0625 mg/ml +0.3 -0.4 -0.2 +0.8 +0.5
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1 +0.4 +0.6 +0.2 -0.6 +0.6
stress Fusidic 0.125 mg/ml +0.6 -0.5 +0.3 +0.4 +0.8
stress Cisplatin 0.006 mg/ml +0.0 +0.3 +0.5 +0.6 +0.5
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