Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 191 experiments or choose conditions or try the comparative fitness browser

500 ntPf1N1B4_2365 and Pf1N1B4_2366 overlap by 4 nucleotidesPf1N1B4_2366 and Pf1N1B4_2367 overlap by 4 nucleotidesPf1N1B4_2367 and Pf1N1B4_2368 are separated by 66 nucleotidesPf1N1B4_2368 and Pf1N1B4_2369 are separated by 1 nucleotides Pf1N1B4_2365 - Malonate decarboxylase gamma subunit, at 2,682,226 to 2,683,029 _2365 Pf1N1B4_2366 - Phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.-), at 2,683,026 to 2,683,643 _2366 Pf1N1B4_2367 - Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39), at 2,683,640 to 2,684,551 _2367 Pf1N1B4_2368 - Malonate transporter, MadL subunit, at 2,684,618 to 2,685,034 _2368 Pf1N1B4_2369 - Malonate transporter, MadM subunit, at 2,685,036 to 2,685,800 _2369
Group Condition Pf1N1B4_2365 Pf1N1B4_2366 Pf1N1B4_2367 Pf1N1B4_2368 Pf1N1B4_2369
carbon source D-Lactate (C) -0.0 -1.2 -0.4 -0.4 -0.3
carbon source carbon source Sucrose 5mM +0.4 -0.4 -0.2 -1.2 -0.4
carbon source Fumarate (C) -0.3 -0.8 -0.2 -0.4 +0.1
carbon source D-Fructose (C) +0.1 -1.0 -0.1 -0.3 -0.1
carbon source carbon source Sucrose 0.25mM -0.3 -0.7 +0.6 +0.8 -1.7
stress Rifampicin 0.004 mg/ml -0.4 -0.6 +0.3 -0.4 -0.1
carbon source D-Glucose (C) -0.1 -0.1 -0.2 -1.1 +0.3
stress copper (II) chloride 2.5 mM -0.1 +0.3 -0.3 -1.0 +0.1
carbon source pyruvate (C) -0.1 -0.5 -0.2 -0.5 +0.4
stress nitrate 100 mM +0.2 -0.7 -0.1 -0.6 +0.3
stress Cobalt chloride 0.3125 mM -0.1 +0.6 -0.4 -0.6 -0.3
carbon source carbon source Sucrose 5mM -0.3 -1.1 -0.9 +1.2 +0.2
nitrogen source nitrogen source nitrate 20mM +0.1 -0.1 -0.6 +0.6 -0.7
carbon source D-Glucose (C) +0.1 -0.3 -0.2 -0.8 +0.6
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 +0.4 -0.9 +0.0 +0.4 -0.5
stress methylglyoxal 0.004 vol% -0.3 +0.4 +0.3 -0.3 -0.5
stress Chloride 200 mM +0.1 -0.9 +0.6 -0.2 +0.1
carbon source carbon source Sucrose 0.25mM -0.7 -0.4 +0.2 +0.4 +0.1
carbon source carbon source Sucrose 1mM +0.3 -0.7 -0.5 +0.1 +0.6
anaerobic N2E2wt with N1B4m denitrifying repB -0.3 +0.7 +0.2 -0.6 -0.1
nitrogen source Uridine (N) -0.3 +0.2 +0.1 -1.0 +0.8
denitrifying Nitrate reduction, replicate A +0.7 +0.1 +0.2 +0.1 -0.8
anaerobic Nitrate reduction +0.1 +1.3 +0.2 -0.9 -0.3
stress Fusidic 0.125 mg/ml -0.3 +0.6 -0.5 +0.3 +0.4
stress Fusidic 0.0625 mg/ml +0.1 +0.3 -0.4 -0.2 +0.8
anaerobic Nitrate reduction +0.2 -0.0 +0.6 +0.4 -0.5
nitrogen source nitrogen source nitrite 1mM +0.2 +0.0 -0.5 +0.6 +0.6
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1 +0.4 +0.4 +0.6 +0.2 -0.6
anaerobic Nitrate reduction -0.0 +1.0 +0.7 -0.0 -0.6
stress Cisplatin 0.006 mg/ml +0.4 +0.0 +0.3 +0.5 +0.6
remove
Pf1N1B4_2365
plot
remove
Pf1N1B4_2366
plot
remove
Pf1N1B4_2367
remove
Pf1N1B4_2368
plot
remove
Pf1N1B4_2369
plot