Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_2363 and Pf1N1B4_2364 overlap by 8 nucleotidesPf1N1B4_2364 and Pf1N1B4_2365 overlap by 4 nucleotidesPf1N1B4_2365 and Pf1N1B4_2366 overlap by 4 nucleotidesPf1N1B4_2366 and Pf1N1B4_2367 overlap by 4 nucleotides Pf1N1B4_2363 - Malonate decarboxylase delta subunit, at 2,681,086 to 2,681,385 _2363 Pf1N1B4_2364 - Malonate decarboxylase beta subunit, at 2,681,378 to 2,682,229 _2364 Pf1N1B4_2365 - Malonate decarboxylase gamma subunit, at 2,682,226 to 2,683,029 _2365 Pf1N1B4_2366 - Phosphoribosyl-dephospho-CoA transferase (EC 2.7.7.-), at 2,683,026 to 2,683,643 _2366 Pf1N1B4_2367 - Malonyl CoA acyl carrier protein transacylase (EC 2.3.1.39), at 2,683,640 to 2,684,551 _2367
Group Condition Pf1N1B4_2363 Pf1N1B4_2364 Pf1N1B4_2365 Pf1N1B4_2366 Pf1N1B4_2367
carbon source D-Lactate (C) N.D. -0.9 -0.0 -1.2 -0.4
carbon source carbon source Sucrose 5mM N.D. -0.0 -0.3 -1.1 -0.9
temperature LB 37C N.D. -1.0 -0.0 -0.7 -0.2
carbon source Fumarate (C) N.D. -0.4 -0.3 -0.8 -0.2
carbon source D-Fructose (C) N.D. -0.3 -0.1 -0.5 -0.6
stress Rifampicin 0.004 mg/ml N.D. -0.8 -0.4 -0.6 +0.3
carbon source carbon source Sucrose 1mM N.D. -0.6 +0.3 -0.7 -0.5
carbon source L-Arabinose (C) N.D. -0.3 -0.1 -0.9 -0.1
carbon source D-Ribose (C) N.D. -0.5 -0.3 -0.6 +0.0
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A N.D. -0.8 +0.2 -0.2 -0.1
carbon source D-Fructose (C) N.D. +0.2 +0.1 -1.0 -0.1
carbon source carbon source Sucrose 0.25mM N.D. -0.4 -0.3 -0.7 +0.6
stress Chloride 200 mM N.D. -0.2 +0.1 -0.9 +0.6
carbon source carbon source Sucrose 0.25mM N.D. +0.4 -0.7 -0.4 +0.2
stress Aluminum chloride 2.5 mM N.D. +0.5 +0.0 -0.8 -0.1
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 N.D. +0.1 +0.4 -0.9 +0.0
stress Tetracycline 0.0004 mg/ml N.D. -0.5 -0.4 +0.3 +0.4
nitrogen source Thymine (N) N.D. +0.3 -0.4 -0.4 +0.4
nitrogen source Adenine (N) N.D. +0.5 -0.5 +0.3 -0.2
stress Fusidic 0.125 mg/ml N.D. +0.4 -0.3 +0.6 -0.5
carbon source carbon source Sucrose 1mM N.D. +0.6 +0.3 -0.4 -0.2
carbon source carbon source Sucrose 5mM N.D. +0.7 +0.4 -0.4 -0.2
nitrogen source nitrate (N) N.D. +0.6 -0.3 +0.6 +0.0
stress Thallium(I) acetate 0.008 mg/ml N.D. +0.2 +0.7 +0.2 +0.4
denitrifying Nitrate reduction, replicate A N.D. +0.5 +0.7 +0.1 +0.2
lb LB N.D. +0.4 +0.4 +0.5 +0.2
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1 N.D. +0.3 +0.4 +0.4 +0.6
anaerobic Nitrate reduction N.D. +1.0 +0.2 -0.0 +0.6
anaerobic Nitrate reduction N.D. +1.1 -0.0 +1.0 +0.7
anaerobic Nitrate reduction N.D. +1.6 +0.1 +1.3 +0.2
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