Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_2282 and Pf1N1B4_2283 are separated by 143 nucleotidesPf1N1B4_2283 and Pf1N1B4_2284 are separated by 22 nucleotidesPf1N1B4_2284 and Pf1N1B4_2285 are separated by 79 nucleotidesPf1N1B4_2285 and Pf1N1B4_2286 are separated by 137 nucleotides Pf1N1B4_2282 - Phosphoserine phosphatase (EC 3.1.3.3), at 2,597,178 to 2,597,834 _2282 Pf1N1B4_2283 - Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-), at 2,597,978 to 2,598,457 _2283 Pf1N1B4_2284 - FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated, at 2,598,480 to 2,600,759 _2284 Pf1N1B4_2285 - Mobile element protein, at 2,600,839 to 2,602,140 _2285 Pf1N1B4_2286 - COG3332, at 2,602,278 to 2,603,024 _2286
Group Condition Pf1N1B4_2282 Pf1N1B4_2283 Pf1N1B4_2284 Pf1N1B4_2285 Pf1N1B4_2286
pH Minimal media pH9 -2.6 -3.8 -3.2 N.D. -0.1
carbon source carbon source Sucrose 0.25mM -3.7 -3.0 -2.4 N.D. +0.3
pH Minimal media pH9 -2.8 -2.4 -3.7 N.D. +0.1
carbon source carbon source Sucrose 0.25mM -3.4 -1.9 -3.4 N.D. +0.6
carbon source carbon source Sucrose 0.5mM -2.6 -2.4 -2.9 N.D. -0.1
carbon source octanoate (C) -3.1 -3.0 -2.2 N.D. +0.3
carbon source carbon source Sucrose 1mM -3.6 -0.8 -3.1 N.D. -0.1
carbon source Carnitine Hydrochloride (C) -2.9 -1.5 -3.4 N.D. +0.1
carbon source L-Arginine (C) -2.5 -2.1 -2.9 N.D. +0.2
carbon source L-Citrulline (C) -2.6 -2.1 -2.4 N.D. +0.3
carbon source carbon source Sucrose 1mM -3.6 -1.5 -1.7 N.D. -0.0
carbon source L-Valine (C) -2.4 -1.4 -2.9 N.D. +0.2
nitrogen source Carnitine Hydrochloride (N) -2.8 -0.8 -3.0 N.D. +0.2
carbon source carbon source Sucrose 5mM -2.9 -2.9 -0.2 N.D. -0.3
carbon source acetate (C) -2.3 -1.5 -2.4 N.D. +0.0
carbon source L-Alanine (C) -2.7 -1.2 -2.2 N.D. +0.1
carbon source L-Leucine (C) -2.7 -0.9 -2.6 N.D. +0.2
carbon source m-Inositol (C) -2.6 -0.6 -2.8 N.D. +0.1
carbon source carbon source Sucrose 5mM -3.8 -2.0 +0.1 N.D. +0.0
nitrogen source D-Alanine (N) -2.9 +0.1 -2.9 N.D. +0.1
pH Minimal media pH6 -3.1 -0.6 -1.9 N.D. +0.2
carbon source L-Glutamine (C) -3.1 -1.5 -1.0 N.D. +0.2
nitrogen source nitrogen source nitrite 0.1mM -1.3 -2.2 -1.9 N.D. +0.4
carbon source acetate (C) -1.9 -1.3 -2.0 N.D. +0.2
carbon source D-Alanine (C) -2.5 -0.6 -2.0 N.D. +0.3
carbon source D-Lactate (C) -2.3 -3.1 +1.6 N.D. +0.2
carbon source D-Galactose (C) -2.8 -1.3 +1.8 N.D. -0.1
carbon source D-Lactate (C) -2.1 -2.2 +2.1 N.D. -0.0
carbon source L-Arabinose (C) -2.9 +0.3 +2.2 N.D. -0.0
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1 -1.0 -1.1 +3.6 N.D. -0.0
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