Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_2216 and Pf1N1B4_2217 are separated by 141 nucleotidesPf1N1B4_2217 and Pf1N1B4_2218 overlap by 1 nucleotidesPf1N1B4_2218 and Pf1N1B4_2219 are separated by 210 nucleotidesPf1N1B4_2219 and Pf1N1B4_2220 overlap by 25 nucleotides Pf1N1B4_2216 - Transcription termination factor Rho, at 2,529,100 to 2,530,359 _2216 Pf1N1B4_2217 - 3-polyprenyl-4-hydroxybenzoate carboxy-lyase (EC 4.1.1.-), at 2,530,501 to 2,531,967 _2217 Pf1N1B4_2218 - 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases / CDP-6-deoxy-delta-3,4-glucoseen reductase-like, at 2,531,967 to 2,532,935 _2218 Pf1N1B4_2219 - ChaC-related protein, at 2,533,146 to 2,533,814 _2219 Pf1N1B4_2220 - Glycerol-3-phosphate transporter, at 2,533,790 to 2,535,139 _2220
Group Condition Pf1N1B4_2216 Pf1N1B4_2217 Pf1N1B4_2218 Pf1N1B4_2219 Pf1N1B4_2220
stress Paraquat dichloride 0.016 mg/mL N.D. N.D. -1.5 -0.4 -0.3
stress Thallium(I) acetate 0.008 mg/ml N.D. N.D. -1.1 -0.4 -0.4
stress Thallium(I) acetate 0.008 mg/ml N.D. N.D. -0.9 -0.0 -0.3
carbon source D-Lactate (C) N.D. N.D. -0.6 -0.5 -0.1
nitrogen source nitrogen source nitrate 20mM N.D. N.D. -0.1 -0.4 -0.4
pH Minimal media pH9 N.D. N.D. -0.8 -0.2 +0.1
stress Cephalothin 2.5 mg/ml N.D. N.D. -0.1 -0.7 +0.0
carbon source pyruvate (C) N.D. N.D. -0.7 +0.1 -0.1
carbon source L-Arginine (C) N.D. N.D. -0.5 -0.2 +0.1
carbon source D-Lactate (C) N.D. N.D. -0.7 -0.1 +0.2
carbon source D,L-Lactate (C) N.D. N.D. -0.4 +0.1 -0.3
carbon source carbon source Sucrose 0.5mM N.D. N.D. +0.2 -0.7 -0.0
stress Rifampicin 0.004 mg/ml N.D. N.D. -0.2 -0.4 +0.2
stress Fusidic 0.125 mg/ml N.D. N.D. +0.7 -0.3 -0.6
nitrogen source L-Isoleucine (N) N.D. N.D. +0.4 -0.3 -0.1
nitrogen source L-Methionine (N) N.D. N.D. +0.6 -0.5 -0.1
carbon source carbon source Sucrose 0.25mM N.D. N.D. -0.4 +0.2 +0.3
stress Benzethonium chloride 0.0125 mM N.D. N.D. -0.2 -0.2 +0.6
stress Fusidic 0.0625 mg/ml N.D. N.D. +0.5 -0.2 -0.1
stress benzoic 0.58 mg/ml N.D. N.D. +0.2 -0.2 +0.4
stress Nalidixic 0.004 mg/ml N.D. N.D. +0.4 +0.1 -0.2
stress Spectinomycin 0.05 mg/ml N.D. N.D. +0.1 -0.1 +0.5
stress Carbenicillin 2 mg/ml N.D. N.D. +1.0 -0.1 -0.5
stress Choline Lysine 6 mM N.D. N.D. +0.5 +0.2 -0.2
stress Doxycycline hyclate 0.0001 mg/ml N.D. N.D. +0.0 +0.7 -0.0
lb LB N.D. N.D. +0.6 +0.2 -0.1
stress 1-ethyl-3-methylimidazolium chloride 80 mM N.D. N.D. +0.5 +0.3 -0.1
stress Gentamicin 0.001 mg/ml N.D. N.D. +0.8 +0.4 +0.0
stress nitrate 100 mM N.D. N.D. +0.7 +0.4 +0.1
stress Sisomicin 0.001 mg/ml N.D. N.D. +1.0 +0.3 +0.3
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