Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_2183 and Pf1N1B4_2184 are separated by 461 nucleotidesPf1N1B4_2184 and Pf1N1B4_2185 are separated by 126 nucleotidesPf1N1B4_2185 and Pf1N1B4_2186 overlap by 4 nucleotidesPf1N1B4_2186 and Pf1N1B4_2187 are separated by 16 nucleotides Pf1N1B4_2183 - Argininosuccinate lyase (EC 4.3.2.1), at 2,494,623 to 2,496,017 _2183 Pf1N1B4_2184 - Autolysis response regulater LytR, at 2,496,479 to 2,497,225 _2184 Pf1N1B4_2185 - Porphobilinogen deaminase (EC 2.5.1.61), at 2,497,352 to 2,498,293 _2185 Pf1N1B4_2186 - Uroporphyrinogen-III synthase (EC 4.2.1.75), at 2,498,290 to 2,499,057 _2186 Pf1N1B4_2187 - Uroporphyrinogen-III synthase (EC 4.2.1.75), at 2,499,074 to 2,500,228 _2187
Group Condition Pf1N1B4_2183 Pf1N1B4_2184 Pf1N1B4_2185 Pf1N1B4_2186 Pf1N1B4_2187
carbon source carbon source Sucrose 0.25mM N.D. -1.1 N.D. N.D. N.D.
anaerobic Nitrate reduction N.D. -1.1 N.D. N.D. N.D.
denitrifying Nitrate reduction, replicate B N.D. -1.1 N.D. N.D. N.D.
carbon source D-Trehalose (C) N.D. -1.1 N.D. N.D. N.D.
carbon source D-Lactate (C) N.D. -1.0 N.D. N.D. N.D.
anaerobic N2E2wt with N1B4m denitrifying repA N.D. -1.0 N.D. N.D. N.D.
carbon source D-Lactate (C) N.D. -1.0 N.D. N.D. N.D.
anaerobic Nitrate reduction N.D. -1.0 N.D. N.D. N.D.
denitrifying Nitrate reduction, replicate A t2 N.D. -1.0 N.D. N.D. N.D.
denitrifying Nitrate reduction, replicate A t1 N.D. -1.0 N.D. N.D. N.D.
denitrifying Nitrate reduction, replicate A N.D. -1.0 N.D. N.D. N.D.
nitrogen source nitrogen source nitrite 0.1mM N.D. -0.9 N.D. N.D. N.D.
nitrogen source nitrogen source nitrite 0.1mM N.D. -0.9 N.D. N.D. N.D.
denitrifying Nitrate reduction, replicate C N.D. -0.9 N.D. N.D. N.D.
carbon source carbon source Sucrose 1mM N.D. -0.9 N.D. N.D. N.D.
anaerobic Nitrate reduction N.D. -0.8 N.D. N.D. N.D.
nitrogen source nitrogen source nitrite 1mM N.D. -0.8 N.D. N.D. N.D.
carbon source D-Fructose (C) N.D. -0.6 N.D. N.D. N.D.
temperature LB 37C N.D. -0.6 N.D. N.D. N.D.
nitrogen source nitrogen source nitrite 0.5mM N.D. -0.5 N.D. N.D. N.D.
carbon source L-Arabinose (C) N.D. +0.5 N.D. N.D. N.D.
carbon source D-Galactose (C) N.D. +0.5 N.D. N.D. N.D.
carbon source Cytidine (C) N.D. +0.5 N.D. N.D. N.D.
carbon source Carnitine Hydrochloride (C) N.D. +0.6 N.D. N.D. N.D.
carbon source L-Isoleucine (C) N.D. +0.6 N.D. N.D. N.D.
carbon source carbon source Sucrose 1mM N.D. +0.6 N.D. N.D. N.D.
carbon source L-Leucine (C) N.D. +0.6 N.D. N.D. N.D.
carbon source butyrate (C) N.D. +0.7 N.D. N.D. N.D.
nitrogen source D-Glucosamine Hydrochloride (N) N.D. +0.9 N.D. N.D. N.D.
carbon source L-Valine (C) N.D. +1.0 N.D. N.D. N.D.
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