Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_2117 and Pf1N1B4_2118 are separated by 29 nucleotidesPf1N1B4_2118 and Pf1N1B4_2119 are separated by 174 nucleotidesPf1N1B4_2119 and Pf1N1B4_2120 are separated by 82 nucleotidesPf1N1B4_2120 and Pf1N1B4_2121 are separated by 202 nucleotides Pf1N1B4_2117 - Ribonuclease PH (EC 2.7.7.56), at 2,429,287 to 2,430,009 _2117 Pf1N1B4_2118 - FIG00955116: hypothetical protein, at 2,430,039 to 2,430,407 _2118 Pf1N1B4_2119 - Exodeoxyribonuclease III (EC 3.1.11.2), at 2,430,582 to 2,431,361 _2119 Pf1N1B4_2120 - Orotate phosphoribosyltransferase (EC 2.4.2.10), at 2,431,444 to 2,432,088 _2120 Pf1N1B4_2121 - Acetylglutamate kinase (EC 2.7.2.8), at 2,432,291 to 2,433,196 _2121
Group Condition Pf1N1B4_2117 Pf1N1B4_2118 Pf1N1B4_2119 Pf1N1B4_2120 Pf1N1B4_2121
carbon source octanoate (C) -2.2 N.D. N.D. N.D. N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B -1.2 N.D. N.D. N.D. N.D.
carbon source L-Leucine (C) -1.2 N.D. N.D. N.D. N.D.
stress Rifampicin 0.004 mg/ml -1.2 N.D. N.D. N.D. N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A -1.0 N.D. N.D. N.D. N.D.
stress Dimethyl Sulfoxide 6.5 vol% -1.0 N.D. N.D. N.D. N.D.
carbon source Tween 20 (C) -0.8 N.D. N.D. N.D. N.D.
nitrogen source L-Isoleucine (N) -0.8 N.D. N.D. N.D. N.D.
carbon source carbon source Sucrose 0.25mM +0.8 N.D. N.D. N.D. N.D.
anaerobic Nitrate reduction +0.8 N.D. N.D. N.D. N.D.
carbon source carbon source Sucrose 0.25mM +0.8 N.D. N.D. N.D. N.D.
stress Nalidixic 0.004 mg/ml +0.8 N.D. N.D. N.D. N.D.
stress Sisomicin 0.001 mg/ml +0.8 N.D. N.D. N.D. N.D.
carbon source D-Fructose (C) +0.9 N.D. N.D. N.D. N.D.
stress Benzethonium chloride 0.0125 mM +0.9 N.D. N.D. N.D. N.D.
carbon source carbon source Sucrose 1mM +0.9 N.D. N.D. N.D. N.D.
pH Minimal media pH9 +0.9 N.D. N.D. N.D. N.D.
carbon source D-Fructose (C) +0.9 N.D. N.D. N.D. N.D.
carbon source carbon source Sucrose 1mM +0.9 N.D. N.D. N.D. N.D.
carbon source carbon source Sucrose 0.5mM +1.0 N.D. N.D. N.D. N.D.
stress Cisplatin 0.006 mg/ml +1.0 N.D. N.D. N.D. N.D.
nitrogen source L-Serine (N) +1.1 N.D. N.D. N.D. N.D.
nitrogen source Uridine (N) +1.1 N.D. N.D. N.D. N.D.
nitrogen source Cytidine (N) +1.1 N.D. N.D. N.D. N.D.
stress 1-ethyl-3-methylimidazolium lysine 5 mM +1.1 N.D. N.D. N.D. N.D.
stress Choline chloride 200 mM +1.2 N.D. N.D. N.D. N.D.
stress nitrate 100 mM +1.3 N.D. N.D. N.D. N.D.
stress Doxycycline hyclate 0.0001 mg/ml +1.4 N.D. N.D. N.D. N.D.
stress Choline Lysine 6 mM +1.7 N.D. N.D. N.D. N.D.
stress Cisplatin 0.006 mg/ml +1.8 N.D. N.D. N.D. N.D.
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