Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_2037 and Pf1N1B4_2038 are separated by 120 nucleotidesPf1N1B4_2038 and Pf1N1B4_2039 are separated by 50 nucleotidesPf1N1B4_2039 and Pf1N1B4_2040 are separated by 11 nucleotidesPf1N1B4_2040 and Pf1N1B4_2041 are separated by 201 nucleotides Pf1N1B4_2037 - Phosphate transport ATP-binding protein PstB (TC 3.A.1.7.1), at 2,326,197 to 2,327,030 _2037 Pf1N1B4_2038 - Phosphate transport system regulatory protein PhoU, at 2,327,151 to 2,327,912 _2038 Pf1N1B4_2039 - hypothetical protein, at 2,327,963 to 2,328,082 _2039 Pf1N1B4_2040 - Phosphate regulon transcriptional regulatory protein PhoB (SphR), at 2,328,094 to 2,329,044 _2040 Pf1N1B4_2041 - Peptidase, M23/M37 family, at 2,329,246 to 2,330,142 _2041
Group Condition Pf1N1B4_2037 Pf1N1B4_2038 Pf1N1B4_2039 Pf1N1B4_2040 Pf1N1B4_2041
temperature LB 10C -2.8 N.D. -0.7 N.D. +0.0
carbon source carbon source Sucrose 1mM +0.5 N.D. -3.1 N.D. +0.1
stress Cholin acetate 10 mM -1.2 N.D. -1.3 N.D. +0.1
nitrogen source nitrogen source nitrite 0.1mM -0.3 N.D. -1.3 N.D. -0.6
stress Thallium(I) acetate 0.008 mg/ml -1.5 N.D. -0.4 N.D. -0.3
anaerobic N2E2wt with N1B4m denitrifying repB -0.4 N.D. -1.6 N.D. -0.0
stress Bacitracin 2 mg/ml -2.5 N.D. +0.5 N.D. -0.0
stress Cisplatin 0.006 mg/ml -1.5 N.D. -0.5 N.D. +0.0
nitrogen source Ammonium chloride (N) -0.5 N.D. -0.8 N.D. -0.6
stress Spectinomycin 0.05 mg/ml -2.1 N.D. +0.2 N.D. -0.1
carbon source carbon source Sucrose 5mM -1.4 N.D. -0.4 N.D. +0.1
carbon source D-Ribose (C) +0.2 N.D. -1.3 N.D. -0.5
stress 5-Hydroxymethylfurfural 2.5 mM -0.7 N.D. -1.1 N.D. +0.2
stress Rifampicin 0.004 mg/ml -1.4 N.D. -0.3 N.D. +0.2
stress Nalidixic 0.004 mg/ml -1.6 N.D. -0.1 N.D. +0.2
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1 -0.7 N.D. +0.1 N.D. -0.9
stress Spectinomycin 0.025 mg/ml -1.5 N.D. +0.2 N.D. -0.2
phagefrs Time16-FRS -1.5 N.D. +0.2 N.D. -0.1
nitrogen source nitrogen source nitrite 0.5mM -1.2 N.D. +0.6 N.D. -0.5
carbon source Glycerol (C) -1.2 N.D. +0.5 N.D. -0.3
stress Chloride 300 mM -0.1 N.D. -1.5 N.D. +0.6
stress Sisomicin 0.001 mg/ml -1.7 N.D. +0.4 N.D. +0.4
anaerobic Nitrate reduction +0.4 N.D. -1.1 N.D. -0.2
carbon source octanoate (C) -2.0 N.D. +1.1 N.D. +0.1
pH Minimal media pH7 -1.2 N.D. +0.5 N.D. +0.2
pH Minimal media pH7 -1.4 N.D. +0.8 N.D. +0.2
stress Cephalothin 2.5 mg/ml -0.8 N.D. +0.8 N.D. -0.3
carbon source L-Alanine (C) -0.4 N.D. +1.1 N.D. -0.6
nitrogen source L-Isoleucine (N) -0.6 N.D. +1.1 N.D. -0.3
stress Gentamicin 0.001 mg/ml -0.9 N.D. +0.9 N.D. +0.3
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