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Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N1B4
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Pf1N1B4_1922 and Pf1N1B4_1923 are separated by 181 nucleotides
Pf1N1B4_1923 and Pf1N1B4_1924 are separated by 18 nucleotides
Pf1N1B4_1924 and Pf1N1B4_1925 are separated by 445 nucleotides
Pf1N1B4_1925 and Pf1N1B4_1926 are separated by 72 nucleotides
Pf1N1B4_1922 - 1-acyl-sn-glycerol-3-phosphate acyltransferase (EC 2.3.1.51), at 2,196,712 to 2,197,491
_1922
Pf1N1B4_1923 - Signal transduction histidine kinase, at 2,197,673 to 2,199,985
_1923
Pf1N1B4_1924 - LysM domain protein, at 2,200,004 to 2,200,942
_1924
Pf1N1B4_1925 - Two-component response regulator, at 2,201,388 to 2,202,107
_1925
Pf1N1B4_1926 - DNA gyrase subunit B (EC 5.99.1.3), at 2,202,180 to 2,204,558
_1926
Group
Condition
Pf1N1B4
_1922
Pf1N1B4
_1923
Pf1N1B4
_1924
Pf1N1B4
_1925
Pf1N1B4
_1926
anaerobic
Nitrate reduction
N.D.
-0.1
-0.4
-0.3
N.D.
nitrogen source
Cytidine (N)
N.D.
-0.0
-0.4
-0.3
N.D.
carbon source
carbon source Sucrose 1mM
N.D.
+0.3
-1.1
+0.1
N.D.
phagefrs
Time16-FRS
N.D.
-0.1
-0.3
-0.1
N.D.
nitrogen source
nitrogen source nitrate 20mM
N.D.
-0.1
-0.3
-0.1
N.D.
nitrogen source
D-Glucosamine Hydrochloride (N)
N.D.
+0.2
-0.5
-0.2
N.D.
carbon source
carbon source Sucrose 0.25mM
N.D.
-0.1
-0.1
-0.4
N.D.
carbon source
D-Galactose (C)
N.D.
-0.1
-0.2
-0.2
N.D.
stress
Nalidixic 0.004 mg/ml
N.D.
+0.0
-0.4
-0.0
N.D.
nitrogen source
nitrogen source nitrite 1mM
N.D.
-0.1
-0.5
+0.2
N.D.
carbon source
L-Citrulline (C)
N.D.
-0.2
-0.3
+0.1
N.D.
carbon source
carbon source Sucrose 0.25mM
N.D.
+0.2
-0.4
-0.2
N.D.
denitrifying
Nitrate reduction, replicate B
N.D.
+0.2
-0.3
-0.2
N.D.
carbon source
D-Trehalose (C)
N.D.
-0.1
+0.2
-0.2
N.D.
carbon source
D-Gluconic Acid (C)
N.D.
-0.2
+0.3
-0.1
N.D.
stress
Benzethonium chloride 0.0125 mM
N.D.
-0.3
+0.4
-0.2
N.D.
stress
nitrite 10 mM
N.D.
-0.1
+0.3
-0.2
N.D.
carbon source
Carnitine Hydrochloride (C)
N.D.
-0.2
+0.2
-0.1
N.D.
stress
acetate 20 mM
N.D.
+0.1
-0.3
+0.2
N.D.
carbon source
Cytidine (C)
N.D.
-0.0
+0.3
-0.2
N.D.
temperature
LB 37C
N.D.
+0.2
-0.3
+0.2
N.D.
nitrogen source
nitrogen source nitrate 20mM
N.D.
-0.1
+0.3
-0.1
N.D.
carbon source
D-Galacturonic Acid (C)
N.D.
+0.0
+0.3
-0.1
N.D.
nitrogen source
nitrogen source nitrite 0.1mM
N.D.
-0.2
+0.3
+0.1
N.D.
stress
Cisplatin 0.006 mg/ml
N.D.
-0.3
+0.5
+0.0
N.D.
stress
Cisplatin 0.006 mg/ml
N.D.
-0.1
+0.4
-0.0
N.D.
carbon source
D-Mannose (C)
N.D.
+0.1
+0.4
-0.1
N.D.
nitrogen source
nitrogen source nitrite 0.5mM
N.D.
+0.3
-0.1
+0.2
N.D.
carbon source
carbon source Sucrose 20mM
N.D.
+0.2
+0.4
-0.1
N.D.
carbon source
carbon source Sucrose 0.5mM
N.D.
+0.3
+0.3
-0.1
N.D.
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