Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_182 and Pf1N1B4_183 overlap by 4 nucleotidesPf1N1B4_183 and Pf1N1B4_184 are separated by 157 nucleotidesPf1N1B4_184 and Pf1N1B4_185 are separated by 11 nucleotidesPf1N1B4_185 and Pf1N1B4_186 overlap by 30 nucleotides Pf1N1B4_182 - Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases, at 225,230 to 225,985 _182 Pf1N1B4_183 - Major facilitator family transporter, at 225,982 to 227,283 _183 Pf1N1B4_184 - Chromosome initiation inhibitor, at 227,441 to 228,400 _184 Pf1N1B4_185 - Cell division protein FtsI [Peptidoglycan synthetase] (EC 2.4.1.129), at 228,412 to 230,304 _185 Pf1N1B4_186 - hypothetical protein, at 230,275 to 230,457 _186
Group Condition Pf1N1B4_182 Pf1N1B4_183 Pf1N1B4_184 Pf1N1B4_185 Pf1N1B4_186
phagefrs Time6-FRS -0.4 -0.4 -0.9 -0.2 N.D.
stress 1-ethyl-3-methylimidazolium lysine 5 mM -0.6 +0.0 -1.3 +0.2 N.D.
nitrogen source nitrogen source nitrite 0.1mM -1.6 -0.4 +0.5 -0.2 N.D.
pH Minimal media pH9 -1.1 -0.3 -0.5 +0.2 N.D.
anaerobic Nitrate reduction -0.8 -0.5 -0.3 -0.0 N.D.
nitrogen source Uridine (N) -0.1 -0.8 -0.3 -0.2 N.D.
nophagecontrol Time16-nophage -0.4 -0.6 -0.3 -0.0 N.D.
carbon source carbon source Sucrose 1mM -0.3 +0.1 -0.9 -0.1 N.D.
phagefrs Time6-FRS +0.3 -0.3 -0.9 -0.2 N.D.
nitrogen source nitrogen source nitrate 5mM +0.0 -0.6 -0.6 +0.1 N.D.
lb LB -0.6 -0.5 +0.4 -0.1 N.D.
stress Choline chloride 200 mM -1.0 +0.4 -0.2 +0.0 N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A +0.3 -0.3 -0.6 -0.2 N.D.
carbon source carbon source Sucrose 0.5mM -0.5 -0.4 +0.5 -0.1 N.D.
nitrogen source Cytosine (N) +0.4 -0.3 -0.4 -0.2 N.D.
carbon source carbon source Sucrose 5mM -1.0 +0.4 +0.2 -0.0 N.D.
stress D-Cycloserine 0.1 mg/ml -0.5 +0.2 -0.3 +0.2 N.D.
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 -0.5 -0.3 +0.1 +0.5 N.D.
temperature LB 37C -0.9 -0.1 +0.5 +0.4 N.D.
carbon source D-Fructose (C) +0.7 -0.7 -0.0 -0.0 N.D.
denitrifying Nitrate reduction, replicate B t2 +0.5 -0.2 -0.5 +0.1 N.D.
stress Choline Lysine 6 mM +0.1 +0.4 -0.8 +0.3 N.D.
denitrifying Nitrate reduction, replicate A +0.8 +0.3 -0.4 -0.5 N.D.
stress Sisomicin 0.001 mg/ml +0.5 +0.2 -0.7 +0.2 N.D.
stress Gentamicin 0.001 mg/ml +0.2 +0.6 -0.5 +0.1 N.D.
lb LB -0.3 +0.8 -0.1 +0.2 N.D.
stress Benzethonium chloride 0.0125 mM +0.5 +0.6 -0.5 +0.2 N.D.
stress Chlorite 1 mM +0.4 +0.7 -0.2 +0.0 N.D.
nitrogen source Carnitine Hydrochloride (N) +0.2 +0.8 +0.1 +0.2 N.D.
temperature LB 37C +1.0 +0.8 +0.6 +0.4 N.D.
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