Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 191 experiments or choose conditions or try the comparative fitness browser

500 ntPf1N1B4_1807 and Pf1N1B4_1808 are separated by 29 nucleotidesPf1N1B4_1808 and Pf1N1B4_1809 are separated by 135 nucleotidesPf1N1B4_1809 and Pf1N1B4_1810 are separated by 323 nucleotidesPf1N1B4_1810 and Pf1N1B4_1811 overlap by 4 nucleotides Pf1N1B4_1807 - Non-ribosomal peptide synthetase modules and related proteins, at 2,074,635 to 2,078,069 _1807 Pf1N1B4_1808 - FIG00958473: hypothetical protein, at 2,078,099 to 2,078,569 _1808 Pf1N1B4_1809 - Chemotactic transducer, at 2,078,705 to 2,080,642 _1809 Pf1N1B4_1810 - RNA polymerase sigma-70 factor, ECF subfamily, at 2,080,966 to 2,081,091 _1810 Pf1N1B4_1811 - RNA polymerase sigma-70 factor, ECF subfamily, at 2,081,088 to 2,081,387 _1811
Group Condition Pf1N1B4_1807 Pf1N1B4_1808 Pf1N1B4_1809 Pf1N1B4_1810 Pf1N1B4_1811
carbon source acetate (C) -0.1 -0.4 -0.1 N.D. -0.4
stress copper (II) chloride 2.5 mM -0.3 +0.1 -0.4 N.D. -0.5
carbon source pyruvate (C) -0.0 -0.1 +0.0 N.D. -0.7
carbon source carbon source Sucrose 0.25mM -0.1 +0.3 -0.2 N.D. -0.8
nitrogen source Adenine (N) -0.2 -0.3 +0.2 N.D. -0.3
carbon source D-Fructose (C) -0.1 -0.3 +0.2 N.D. -0.4
nitrogen source Cytidine (N) -0.1 -0.2 +0.2 N.D. -0.5
carbon source L-Lactate (C) -0.1 -0.2 +0.2 N.D. -0.5
stress nitrite 10 mM -0.2 +0.1 +0.0 N.D. -0.5
carbon source carbon source Sucrose 5mM +0.0 +0.2 -1.0 N.D. +0.3
carbon source carbon source Sucrose 1mM -0.3 -0.6 +0.0 N.D. +0.5
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 -0.0 -0.7 +0.0 N.D. +0.4
carbon source D-Lactate (C) -0.1 -0.1 +0.3 N.D. -0.4
pH Minimal media pH9 -0.0 +0.3 -0.3 N.D. -0.2
carbon source carbon source Sucrose 1mM +0.0 -0.1 -0.6 N.D. +0.5
stress Rifampicin 0.004 mg/ml +0.1 +0.2 +0.2 N.D. -0.5
denitrifying Nitrate reduction, replicate A +0.1 -0.6 +0.0 N.D. +0.3
lb LB -0.1 +0.3 +0.2 N.D. -0.3
stress Paraquat dichloride 0.016 mg/mL -0.2 +0.4 +0.3 N.D. -0.3
carbon source carbon source Sucrose 0.5mM -0.2 +0.3 +0.2 N.D. -0.1
stress 1-ethyl-3-methylimidazolium chloride 80 mM -0.0 +0.2 -0.3 N.D. +0.7
nitrogen source nitrogen source nitrate 20mM -0.2 +0.4 -0.1 N.D. +0.6
nitrogen source nitrogen source nitrite 1mM +0.0 +0.3 -0.0 N.D. +0.5
nophagecontrol Time16-nophage +0.2 +0.3 -0.1 N.D. +0.4
stress Fusidic 0.0625 mg/ml +0.3 -0.1 +0.3 N.D. +0.4
temperature LB 37C +0.2 +0.0 +0.1 N.D. +0.6
carbon source carbon source Sucrose 20mM +0.1 +0.4 +0.1 N.D. +0.3
carbon source Tween 20 (C) +0.1 +0.3 +0.3 N.D. +0.3
denitrifying Nitrate reduction, replicate C -0.1 +0.2 +0.2 N.D. +0.6
temperature LB 37C -0.2 +0.5 +0.3 N.D. +0.6
remove
Pf1N1B4_1807
plot		 remove
Pf1N1B4_1808
plot		 remove
Pf1N1B4_1809		 remove
Pf1N1B4_1810
plot		 remove
Pf1N1B4_1811
plot