Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_1714 and Pf1N1B4_1715 are separated by 254 nucleotidesPf1N1B4_1715 and Pf1N1B4_1716 are separated by 59 nucleotidesPf1N1B4_1716 and Pf1N1B4_1717 are separated by 453 nucleotidesPf1N1B4_1717 and Pf1N1B4_1718 are separated by 100 nucleotides Pf1N1B4_1714 - Methionine ABC transporter substrate-binding protein, at 1,961,831 to 1,962,613 _1714 Pf1N1B4_1715 - Functional role page for Anaerobic nitric oxide reductase transcription regulator NorR, at 1,962,868 to 1,963,800 _1715 Pf1N1B4_1716 - FIG00953394: hypothetical protein, at 1,963,860 to 1,964,441 _1716 Pf1N1B4_1717 - Fatty acid desaturase, at 1,964,895 to 1,965,968 _1717 Pf1N1B4_1718 - Transcriptional regulator, AraC family, at 1,966,069 to 1,967,073 _1718
Group Condition Pf1N1B4_1714 Pf1N1B4_1715 Pf1N1B4_1716 Pf1N1B4_1717 Pf1N1B4_1718
nitrogen source nitrogen source nitrite 0.1mM -0.9 -0.1 -2.1 -0.6 +0.7
carbon source carbon source Sucrose 1mM -0.4 +0.1 -1.7 -0.1 -0.5
stress methylglyoxal 0.008 vol% -0.4 -0.4 -0.8 +0.1 +0.1
carbon source carbon source Sucrose 0.5mM -1.5 +0.0 +0.2 -0.0 -0.0
anaerobic N2E2wt with N1B4m denitrifying repA +0.1 -0.1 -1.1 -0.1 -0.0
stress Rifampicin 0.004 mg/ml -0.2 +0.1 -0.7 -0.0 -0.4
carbon source a-Ketoglutaric (C) -0.1 +0.1 -0.9 +0.2 -0.1
nitrogen source nitrogen source nitrate 20mM -0.5 +0.0 -0.6 +0.0 +0.3
stress Chloride 300 mM +0.4 -0.2 -0.3 -0.0 -0.6
stress D-Cycloserine 0.1 mg/ml +0.4 +0.1 -0.3 -0.2 -0.4
denitrifying Nitrate reduction, replicate C t3 +0.3 -0.3 -0.4 +0.3 -0.2
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 -0.2 +0.2 -0.5 -0.3 +0.4
carbon source carbon source Sucrose 5mM +0.2 +0.1 -1.2 +0.1 +0.4
stress Gentamicin 0.001 mg/ml +0.6 -0.3 -0.5 +0.0 -0.1
carbon source L-Glutamic (C) +0.4 +0.3 -0.7 -0.0 -0.1
stress Doxycycline hyclate 0.0001 mg/ml +0.8 +0.0 -0.2 +0.0 -0.6
anaerobic Nitrate reduction +0.4 -0.1 -0.4 -0.1 +0.4
carbon source D-Alanine (C) +0.4 +0.2 -0.3 -0.1 +0.2
carbon source L-Citrulline (C) +0.3 +0.3 +0.4 -0.2 -0.2
nitrogen source L-Valine (N) +0.4 +0.3 +0.2 +0.2 -0.5
carbon source carbon source Sucrose 5mM -0.1 +0.3 +0.4 +0.2 -0.3
nitrogen source nitrogen source Ammonium chloride 20mM -0.3 +0.1 +0.7 -0.2 +0.4
stress copper (II) chloride 2.5 mM +0.4 +0.2 -0.3 -0.0 +0.4
nitrogen source L-Leucine (N) +0.5 +0.2 +0.4 +0.0 -0.2
nitrogen source D-Glucosamine Hydrochloride (N) +0.3 -0.2 +0.5 +0.4 -0.1
carbon source Putrescine (C) +0.5 +0.3 -0.1 -0.1 +0.3
carbon source carbon source Sucrose 0.25mM -0.0 +0.4 -0.5 +0.3 +0.8
nitrogen source Cytidine (N) +0.6 -0.1 +0.5 +0.2 -0.1
temperature LB 37C +0.1 +0.2 +1.3 +0.1 -0.3
carbon source carbon source Sucrose 0.25mM -0.1 +0.2 +1.2 -0.1 +0.6
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