Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_1692 and Pf1N1B4_1693 are separated by 299 nucleotidesPf1N1B4_1693 and Pf1N1B4_1694 overlap by 1 nucleotidesPf1N1B4_1694 and Pf1N1B4_1695 are separated by 4 nucleotidesPf1N1B4_1695 and Pf1N1B4_1696 are separated by 504 nucleotides Pf1N1B4_1692 - D-cysteine desulfhydrase (EC 4.4.1.15), at 1,938,651 to 1,939,643 _1692 Pf1N1B4_1693 - Cystine ABC transporter, periplasmic cystine-binding protein FliY, at 1,939,943 to 1,940,737 _1693 Pf1N1B4_1694 - Cystine ABC transporter, permease protein, at 1,940,737 to 1,941,402 _1694 Pf1N1B4_1695 - Cystine ABC transporter, ATP-binding protein, at 1,941,407 to 1,942,156 _1695 Pf1N1B4_1696 - FIG00957011: hypothetical protein, at 1,942,661 to 1,943,425 _1696
Group Condition Pf1N1B4_1692 Pf1N1B4_1693 Pf1N1B4_1694 Pf1N1B4_1695 Pf1N1B4_1696
stress Thallium(I) acetate 0.008 mg/ml -0.1 -0.8 -0.6 -2.2 +0.0
temperature LB 37C +0.1 +0.2 -0.1 -2.5 -0.2
carbon source carbon source Sucrose 5mM +0.1 -0.3 +0.1 -1.2 -0.5
carbon source L-Alanine (C) -0.3 -0.3 -0.1 -1.1 -0.0
stress Thallium(I) acetate 0.008 mg/ml -0.1 -0.7 -0.3 -0.3 -0.2
carbon source pyruvate (C) -0.0 -0.2 +0.1 -1.2 -0.3
nitrogen source nitrogen source nitrite 0.1mM +0.1 +0.0 +0.6 -2.0 -0.1
stress Cisplatin 0.006 mg/ml +0.3 -0.1 -0.1 -1.4 -0.1
carbon source D-Glucose (C) +0.1 -0.1 +0.0 -1.4 +0.2
stress copper (II) chloride 2.5 mM -0.2 -0.0 +0.1 -1.1 -0.1
stress Gentamicin 0.001 mg/ml +0.0 +0.0 +0.3 -1.4 -0.1
nitrogen source nitrogen source nitrate 20mM +0.1 -0.3 +0.4 -1.8 +0.6
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 -0.2 -0.1 -0.1 -1.0 +0.4
stress Cobalt chloride 0.3125 mM +0.8 -0.6 -0.6 -0.5 +0.2
carbon source D-Mannose (C) -0.1 +0.3 +0.0 -0.9 +0.2
anaerobic N2E2wt with N1B4m denitrifying repB +0.1 +0.3 +0.3 -1.5 +0.5
nitrogen source nitrogen source nitrate 5mM -0.2 -0.3 +0.2 +0.7 -0.4
stress Aluminum chloride 2.5 mM -0.3 -0.1 -0.1 +0.9 -0.4
nitrogen source nitrogen source nitrite 1mM +0.2 -0.0 -0.0 +1.1 -0.5
carbon source butyrate (C) -0.3 +0.1 +0.0 +1.0 +0.1
nitrogen source nitrogen source Ammonium chloride 20mM -0.1 +0.2 -0.1 +1.0 +0.0
nitrogen source Uridine (N) -0.3 +0.4 +0.4 +0.5 +0.2
carbon source carbon source Sucrose 1mM -0.1 +0.4 -0.1 +0.7 +0.4
stress Cholin acetate 10 mM +0.2 -0.3 +0.2 +0.9 +0.3
carbon source carbon source Sucrose 0.25mM -0.1 +0.5 +0.2 +0.9 -0.2
carbon source carbon source Sucrose 0.5mM -0.0 +0.3 +0.3 +1.1 -0.3
nitrogen source Cytidine (N) -0.1 +1.2 +0.7 +0.2 +0.2
carbon source carbon source Sucrose 0.25mM -0.0 +0.4 +0.7 +1.0 +0.5
carbon source carbon source Sucrose 1mM -0.4 +0.6 +0.7 +1.6 +0.3
nitrogen source L-Methionine (N) -0.0 +1.4 +1.0 +1.6 +0.4
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