Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_1670 and Pf1N1B4_1671 are separated by 127 nucleotidesPf1N1B4_1671 and Pf1N1B4_1672 are separated by 137 nucleotidesPf1N1B4_1672 and Pf1N1B4_1673 are separated by 91 nucleotidesPf1N1B4_1673 and Pf1N1B4_1674 overlap by 4 nucleotides Pf1N1B4_1670 - FIG001957: putative hydrolase, at 1,913,918 to 1,914,580 _1670 Pf1N1B4_1671 - FIG00954962: hypothetical protein, at 1,914,708 to 1,915,148 _1671 Pf1N1B4_1672 - Hydrogen peroxide-inducible genes activator, at 1,915,286 to 1,916,173 _1672 Pf1N1B4_1673 - Formate dehydrogenase chain D (EC 1.2.1.2), at 1,916,265 to 1,917,104 _1673 Pf1N1B4_1674 - Putative formate dehydrogenase oxidoreductase protein, at 1,917,101 to 1,919,449 _1674
Group Condition Pf1N1B4_1670 Pf1N1B4_1671 Pf1N1B4_1672 Pf1N1B4_1673 Pf1N1B4_1674
carbon source L-Histidine (C) -0.2 +0.0 -0.5 -1.2 -1.0
temperature LB 37C -1.9 -0.8 +0.2 +0.2 -0.1
carbon source Carnitine Hydrochloride (C) +0.0 -0.6 -0.0 -1.4 -0.1
carbon source carbon source Sucrose 0.25mM -0.5 -1.6 -0.1 +0.1 +0.3
carbon source L-Asparagine (C) -0.7 -0.8 +0.1 -0.4 -0.0
carbon source carbon source Sucrose 0.5mM -0.4 -1.1 -0.1 -0.3 +0.1
lb LB -0.3 -1.3 -0.1 +0.2 +0.0
stress Dimethyl Sulfoxide 6.5 vol% -0.8 -0.6 +0.1 -0.2 +0.2
denitrifying Nitrate reduction, replicate B -0.8 -0.7 +0.2 -0.1 +0.0
carbon source butyrate (C) -0.6 -0.6 +0.2 -0.3 +0.0
nitrogen source nitrogen source Ammonium chloride 20mM +0.1 -1.3 +0.1 -0.2 +0.1
nitrogen source L-Leucine (N) -0.5 -0.7 +0.4 -0.3 +0.1
stress Nalidixic 0.004 mg/ml +0.2 -1.1 -0.3 +0.1 +0.1
carbon source L-Leucine (C) -0.3 -1.0 +0.3 +0.1 -0.0
carbon source Glycerol (C) -0.5 -0.7 +0.4 -0.0 +0.1
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 +0.7 -1.1 -0.5 +0.3 -0.1
carbon source D-Mannose (C) -0.6 -0.3 +0.5 -0.2 +0.2
carbon source Cytidine (C) -0.8 +0.6 +0.0 -0.3 -0.0
temperature LB 37C +0.3 -1.9 +0.2 +0.5 +0.5
stress Chlorite 1 mM -0.5 -0.5 +0.4 +0.2 +0.3
nitrogen source nitrogen source nitrite 0.1mM -0.8 -0.2 +0.5 +0.5 -0.2
denitrifying Nitrate reduction, replicate B t2 -0.7 +0.8 -0.4 +0.3 -0.2
nitrogen source D-Glucosamine Hydrochloride (N) -0.7 +0.7 -0.3 +0.3 +0.2
stress Benzethonium chloride 0.0125 mM +0.4 +0.8 -0.1 -0.6 +0.0
denitrifying Nitrate reduction, replicate C t2 -0.4 +0.5 +0.2 +0.9 -0.2
carbon source D-Fructose (C) +1.1 +0.1 +0.4 +0.3 -0.0
carbon source D-Glucose (C) +0.6 +0.5 +0.4 +0.3 -0.0
anaerobic Nitrate reduction +0.4 +0.5 +0.2 +1.2 -0.1
anaerobic Nitrate reduction +0.3 +0.5 +0.1 +1.3 +0.1
anaerobic Nitrate reduction +0.7 -0.2 +0.3 +1.4 +0.2
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