Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Pseudomonas fluorescens FW300-N1B4
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 30 experiments (either direction), sorted by average fitness
Or view
all 197 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
Pf1N1B4_1661 and Pf1N1B4_1662 are separated by 3 nucleotides
Pf1N1B4_1662 and Pf1N1B4_1663 are separated by 329 nucleotides
Pf1N1B4_1663 and Pf1N1B4_1664 are separated by 886 nucleotides
Pf1N1B4_1664 and Pf1N1B4_1665 are separated by 160 nucleotides
Pf1N1B4_1661 - Agmatine deiminase (EC 3.5.3.12), at 1,901,848 to 1,902,954
_1661
Pf1N1B4_1662 - N-carbamoylputrescine amidase (3.5.1.53) / Aliphatic amidase AmiE (EC 3.5.1.4), at 1,902,958 to 1,903,836
_1662
Pf1N1B4_1663 - 4-aminobutyrate aminotransferase (EC 2.6.1.19), at 1,904,166 to 1,907,078
_1663
Pf1N1B4_1664 - dTDP-4-dehydrorhamnose 3,5-epimerase (EC 5.1.3.13), at 1,907,965 to 1,908,510
_1664
Pf1N1B4_1665 - Signal transduction histidine kinase regulating C4-dicarboxylate transport system, at 1,908,671 to 1,910,425
_1665
Group
Condition
Pf1N1B4
_1661
Pf1N1B4
_1662
Pf1N1B4
_1663
Pf1N1B4
_1664
Pf1N1B4
_1665
temperature
LB 37C
+0.2
-0.4
-0.2
-1.4
-0.0
denitrifying
Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1
-0.2
-1.4
-0.1
+0.0
-0.1
stress
Gentamicin 0.001 mg/ml
-2.1
+0.1
-0.0
+0.1
+0.2
stress
Carbenicillin 2 mg/ml
-0.8
-0.4
-0.1
-0.0
-0.3
nitrogen source
Cytidine (N)
-0.8
-0.5
+0.1
-0.4
+0.0
carbon source
L-Leucine (C)
-0.7
-0.2
+0.2
-0.4
-0.3
stress
Paraquat dichloride 0.016 mg/mL
-1.5
-0.0
+0.1
-0.2
+0.1
pH
Minimal media pH9
-0.6
-0.1
-0.0
+0.0
-0.8
pH
Minimal media pH9
-0.9
+0.1
-0.0
-0.2
-0.2
carbon source
carbon source Sucrose 1mM
-0.4
-0.2
-0.3
-0.5
+0.2
nitrogen source
L-Methionine (N)
-1.7
+0.3
+0.2
+0.1
-0.1
stress
Cisplatin 0.006 mg/ml
-1.4
-0.1
+0.0
-0.1
+0.3
nitrogen source
nitrogen source nitrate 20mM
-0.4
-0.3
-0.2
+0.2
-0.4
stress
Cobalt chloride 0.3125 mM
-0.7
-0.1
+0.2
-0.5
+0.1
nitrogen source
Uridine (N)
-0.8
-0.5
+0.3
+0.0
-0.0
carbon source
octanoate (C)
-0.9
-0.4
+0.3
+0.1
-0.2
stress
Cisplatin 0.006 mg/ml
-1.0
-0.2
-0.0
+0.0
+0.3
carbon source
a-Ketoglutaric (C)
-0.6
-0.4
+0.0
-0.4
+0.6
stress
Sisomicin 0.001 mg/ml
-0.8
-0.4
-0.1
+0.2
+0.5
carbon source
Uridine (C)
-0.9
-0.2
+0.1
+0.2
+0.3
stress
Spectinomycin 0.05 mg/ml
-0.8
+0.0
-0.2
+0.1
+0.3
carbon source
carbon source Sucrose 0.25mM
+0.4
-0.0
-0.3
-0.4
+0.3
stress
Doxycycline hyclate 0.0001 mg/ml
-0.3
-1.0
+0.2
+0.3
+0.9
stress
Chloride 300 mM
-0.7
+0.3
+0.0
+0.3
+0.3
carbon source
carbon source Sucrose 0.25mM
+0.5
+0.4
-0.1
-0.0
-0.4
anaerobic
Nitrate reduction
+0.6
+0.2
-0.1
-0.3
+0.2
nitrogen source
nitrogen source nitrite 0.1mM
+0.7
-0.0
-0.0
+0.4
-0.3
stress
Nalidixic 0.004 mg/ml
+0.4
+0.5
-0.1
+0.2
+0.3
stress
Choline Lysine 6 mM
+0.5
+0.4
-0.2
+0.3
+0.4
stress
Fusidic 0.0625 mg/ml
+0.8
+0.3
+0.1
+0.5
+0.5
remove
Pf1N1B4_1661
plot
remove
Pf1N1B4_1662
plot
remove
Pf1N1B4_1663
remove
Pf1N1B4_1664
plot
remove
Pf1N1B4_1665
plot