Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_1545 and Pf1N1B4_1546 are separated by 183 nucleotidesPf1N1B4_1546 and Pf1N1B4_1547 are separated by 13 nucleotidesPf1N1B4_1547 and Pf1N1B4_1548 are separated by 302 nucleotidesPf1N1B4_1548 and Pf1N1B4_1549 overlap by 4 nucleotides Pf1N1B4_1545 - NADP-dependent malic enzyme (EC 1.1.1.40), at 1,782,659 to 1,783,927 _1545 Pf1N1B4_1546 - Thermonuclease family protein, at 1,784,111 to 1,784,911 _1546 Pf1N1B4_1547 - LSU ribosomal protein L31p @ LSU ribosomal protein L31p, zinc-dependent, at 1,784,925 to 1,785,155 _1547 Pf1N1B4_1548 - Helicase PriA essential for oriC/DnaA-independent DNA replication, at 1,785,458 to 1,787,251 _1548 Pf1N1B4_1549 - Helicase PriA essential for oriC/DnaA-independent DNA replication, at 1,787,248 to 1,787,676 _1549
Group Condition Pf1N1B4_1545 Pf1N1B4_1546 Pf1N1B4_1547 Pf1N1B4_1548 Pf1N1B4_1549
carbon source L-Glutamic (C) -2.1 -0.8 N.D. N.D. N.D.
carbon source L-Arginine (C) -2.1 -0.6 N.D. N.D. N.D.
carbon source octanoate (C) -2.2 -0.4 N.D. N.D. N.D.
carbon source Tween 20 (C) -1.9 -0.6 N.D. N.D. N.D.
nitrogen source L-Glutamic (N) -2.6 +0.2 N.D. N.D. N.D.
stress nitrite 10 mM -2.3 -0.1 N.D. N.D. N.D.
carbon source L-Histidine (C) -2.2 -0.2 N.D. N.D. N.D.
carbon source L-Citrulline (C) -1.8 -0.5 N.D. N.D. N.D.
carbon source a-Ketoglutaric (C) -2.5 +0.2 N.D. N.D. N.D.
carbon source a-Ketoglutaric (C) -2.4 +0.2 N.D. N.D. N.D.
carbon source L-Leucine (C) -1.6 -0.6 N.D. N.D. N.D.
carbon source L-Glutamine (C) -2.1 -0.1 N.D. N.D. N.D.
carbon source L-Isoleucine (C) -1.7 -0.5 N.D. N.D. N.D.
carbon source butyrate (C) -1.7 -0.4 N.D. N.D. N.D.
carbon source L-Asparagine (C) -1.7 -0.2 N.D. N.D. N.D.
phagefrs Time16-FRS -1.0 -0.5 N.D. N.D. N.D.
nophagecontrol TIme6-nophage -1.0 -0.4 N.D. N.D. N.D.
nophagecontrol Time16-nophage -0.9 -0.5 N.D. N.D. N.D.
carbon source Fumarate (C) -1.8 +0.5 N.D. N.D. N.D.
carbon source Fumarate (C) -1.4 +0.4 N.D. N.D. N.D.
carbon source acetate (C) -1.4 +0.5 N.D. N.D. N.D.
carbon source acetate (C) -1.3 +0.5 N.D. N.D. N.D.
stress Choline chloride 200 mM +0.6 -0.9 N.D. N.D. N.D.
stress Rifampicin 0.004 mg/ml +0.6 -0.8 N.D. N.D. N.D.
stress Fusidic 0.0625 mg/ml +1.0 -0.6 N.D. N.D. N.D.
stress Doxycycline hyclate 0.0001 mg/ml +1.4 -0.5 N.D. N.D. N.D.
pH Minimal media pH9 +2.5 -0.9 N.D. N.D. N.D.
pH Minimal media pH9 +2.4 -0.7 N.D. N.D. N.D.
carbon source carbon source Sucrose 0.25mM +1.5 +0.3 N.D. N.D. N.D.
stress Fusidic 0.125 mg/ml +1.7 +0.3 N.D. N.D. N.D.
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