Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_1522 and Pf1N1B4_1523 are separated by 296 nucleotidesPf1N1B4_1523 and Pf1N1B4_1524 overlap by 1 nucleotidesPf1N1B4_1524 and Pf1N1B4_1525 are separated by 381 nucleotidesPf1N1B4_1525 and Pf1N1B4_1526 are separated by 35 nucleotides Pf1N1B4_1522 - Transcriptional regulators, LysR family, at 1,754,100 to 1,755,014 _1522 Pf1N1B4_1523 - hypothetical protein, at 1,755,311 to 1,755,913 _1523 Pf1N1B4_1524 - Permease of the drug/metabolite transporter (DMT) superfamily, at 1,755,913 to 1,756,809 _1524 Pf1N1B4_1525 - hypothetical protein, at 1,757,191 to 1,757,448 _1525 Pf1N1B4_1526 - hypothetical protein, at 1,757,484 to 1,757,612 _1526
Group Condition Pf1N1B4_1522 Pf1N1B4_1523 Pf1N1B4_1524 Pf1N1B4_1525 Pf1N1B4_1526
stress D-Cycloserine 0.1 mg/ml -0.6 -0.6 -0.3 -0.2 N.D.
stress Fusidic 0.125 mg/ml -0.9 +0.0 -0.6 -0.2 N.D.
stress 1-ethyl-3-methylimidazolium lysine 5 mM -0.5 -0.3 -0.3 -0.5 N.D.
stress Gentamicin 0.001 mg/ml -0.3 -0.4 -0.5 -0.2 N.D.
carbon source carbon source Sucrose 0.5mM -0.3 -0.4 -0.3 -0.2 N.D.
carbon source carbon source Sucrose 1mM -0.9 +0.1 -0.0 -0.3 N.D.
stress methylglyoxal 0.008 vol% -0.8 -0.2 -0.2 +0.1 N.D.
temperature LB 37C -0.2 -0.3 -0.2 -0.3 N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate A -0.3 -0.4 -0.3 +0.0 N.D.
carbon source carbon source Sucrose 1mM -0.2 -0.2 -0.4 -0.2 N.D.
nitrogen source nitrogen source Ammonium chloride 20mM -0.1 -0.2 -0.2 -0.4 N.D.
stress methylglyoxal 0.004 vol% -0.5 -0.1 -0.2 -0.1 N.D.
carbon source carbon source Sucrose 5mM -0.1 -0.3 -0.3 -0.1 N.D.
stress copper (II) chloride 2.5 mM -0.4 -0.1 +0.0 -0.3 N.D.
nitrogen source nitrogen source nitrite 0.1mM +0.1 -0.1 -0.2 -0.5 N.D.
stress Choline Lysine 6 mM +0.0 -0.5 -0.5 +0.3 N.D.
stress Chloride 300 mM -0.1 -0.3 -0.4 +0.2 N.D.
stress Dimethyl Sulfoxide 6.5 vol% -0.1 +0.4 -0.3 -0.3 N.D.
temperature LB 37C -0.1 -0.4 +0.1 +0.3 N.D.
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 +0.1 +0.4 -0.4 +0.0 N.D.
stress Cholin acetate 10 mM -0.0 +0.0 -0.3 +0.5 N.D.
stress Paraquat dichloride 0.016 mg/mL -0.5 +0.4 +0.2 +0.2 N.D.
carbon source L-Arabinose (C) +0.2 +0.4 -0.2 +0.1 N.D.
carbon source carbon source Sucrose 0.25mM +0.0 +0.5 +0.2 -0.2 N.D.
carbon source D-Lactate (C) +0.3 +0.3 -0.1 +0.1 N.D.
stress sodium fluoride 12.5 mM -0.1 +0.2 -0.1 +0.6 N.D.
carbon source pyruvate (C) -0.0 +0.6 -0.1 +0.1 N.D.
stress Benzethonium chloride 0.0125 mM +0.5 -0.0 +0.3 -0.1 N.D.
anaerobic N2E2wt with N1B4m denitrifying repA +0.1 +0.3 +0.0 +0.4 N.D.
nitrogen source Ammonium chloride (N) +0.2 +0.3 +0.3 +0.2 N.D.
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