Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_1462 and Pf1N1B4_1463 are separated by 18 nucleotidesPf1N1B4_1463 and Pf1N1B4_1464 are separated by 65 nucleotidesPf1N1B4_1464 and Pf1N1B4_1465 overlap by 14 nucleotidesPf1N1B4_1465 and Pf1N1B4_1466 overlap by 42 nucleotides Pf1N1B4_1462 - Oligosaccharide repeat unit polymerase Wzy; O-antigen ligase, at 1,676,848 to 1,677,480 _1462 Pf1N1B4_1463 - hypothetical protein, at 1,677,499 to 1,678,716 _1463 Pf1N1B4_1464 - Glycosyl transferase, at 1,678,782 to 1,679,693 _1464 Pf1N1B4_1465 - Carbamoyltransferase in large core OS assembly cluster, at 1,679,680 to 1,681,434 _1465 Pf1N1B4_1466 - hypothetical protein, at 1,681,393 to 1,681,518 _1466
Group Condition Pf1N1B4_1462 Pf1N1B4_1463 Pf1N1B4_1464 Pf1N1B4_1465 Pf1N1B4_1466
carbon source L-Arginine (C) -0.9 -2.0 -1.2 -3.2 -2.0
stress Paraquat dichloride 0.016 mg/mL -0.9 -2.7 +0.2 -0.1 -1.0
carbon source Carnitine Hydrochloride (C) -2.3 -1.7 -0.3 +0.5 +0.7
stress Bacitracin 2 mg/ml -2.8 +0.8 +0.9 -0.1 -0.5
stress benzoic 0.58 mg/ml -2.6 +0.8 +1.0 +0.2 -0.4
stress Carbenicillin 2 mg/ml -2.5 -1.4 +1.0 +1.7 +1.3
stress Nalidixic 0.004 mg/ml -2.4 +1.6 +1.7 -0.2 -0.3
carbon source octanoate (C) -2.5 +0.4 +4.0 -0.4 -0.3
stress Benzethonium chloride 0.0125 mM -2.3 +1.8 +2.0 -0.2 -0.0
carbon source carbon source Sucrose 1mM -1.0 +0.6 +1.2 +1.4 +0.7
carbon source carbon source Sucrose 20mM -1.1 +1.6 +1.2 +1.0 +0.9
stress Tetracycline 0.0004 mg/ml -2.2 +2.1 +2.6 +0.7 +0.5
pH Minimal media pH9 +3.0 -2.2 -0.5 +2.0 +1.5
stress Rifampicin 0.004 mg/ml -2.6 +2.3 +2.3 +1.1 +0.8
carbon source carbon source Sucrose 1mM -0.6 +1.4 +0.9 +1.4 +0.8
carbon source carbon source Sucrose 20mM -1.2 +1.5 +1.6 +1.2 +0.8
stress Spectinomycin 0.025 mg/ml -1.6 +2.0 +1.6 +1.1 +1.1
carbon source carbon source Sucrose 0.25mM -1.0 +0.5 +1.2 +2.0 +1.4
carbon source carbon source Sucrose 5mM -0.3 +1.5 +1.3 +1.2 +0.7
nitrogen source nitrogen source nitrate 20mM +0.2 +1.4 +1.0 +1.0 +1.1
pH Minimal media pH9 +3.1 -1.5 -0.1 +1.9 +1.4
carbon source D-Fructose (C) +0.8 +1.8 +1.3 +0.3 +0.7
carbon source L-Valine (C) +1.0 +1.0 +0.8 +1.1 +1.2
stress 5-Hydroxymethylfurfural 2.5 mM -0.9 +2.8 +2.7 +0.6 +0.6
nitrogen source nitrogen source nitrite 1mM -0.6 +2.1 +1.5 +1.6 +1.2
stress Sisomicin 0.001 mg/ml +1.1 +1.2 +1.0 +1.3 +1.3
stress Cisplatin 0.006 mg/ml +0.7 +2.1 +0.8 +1.4 +1.3
carbon source carbon source Sucrose 5mM +0.0 +2.2 +2.1 +1.6 +1.0
stress Spectinomycin 0.05 mg/ml -2.3 +4.5 +3.0 +2.3 +2.3
stress Doxycycline hyclate 0.0001 mg/ml -2.1 +5.4 +5.5 +2.2 +2.3
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