Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_1436 and Pf1N1B4_1437 are separated by 176 nucleotidesPf1N1B4_1437 and Pf1N1B4_1438 are separated by 10 nucleotidesPf1N1B4_1438 and Pf1N1B4_1439 overlap by 4 nucleotidesPf1N1B4_1439 and Pf1N1B4_1440 overlap by 1 nucleotides Pf1N1B4_1436 - Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1), at 1,646,856 to 1,647,569 _1436 Pf1N1B4_1437 - Topoisomerase IV subunit A (EC 5.99.1.-), at 1,647,746 to 1,650,013 _1437 Pf1N1B4_1438 - Transporter, at 1,650,024 to 1,650,545 _1438 Pf1N1B4_1439 - FIG00953138: hypothetical protein, at 1,650,542 to 1,651,531 _1439 Pf1N1B4_1440 - Topoisomerase IV subunit B (EC 5.99.1.-), at 1,651,531 to 1,653,435 _1440
Group Condition Pf1N1B4_1436 Pf1N1B4_1437 Pf1N1B4_1438 Pf1N1B4_1439 Pf1N1B4_1440
nitrogen source nitrogen source Ammonium chloride 20mM N.D. N.D. N.D. -0.7 N.D.
carbon source L-Arabinose (C) N.D. N.D. N.D. -0.7 N.D.
denitrifying Nitrate reduction, replicate C N.D. N.D. N.D. -0.6 N.D.
nitrogen source nitrogen source Ammonium chloride 20mM N.D. N.D. N.D. -0.5 N.D.
carbon source D-Lactate (C) N.D. N.D. N.D. -0.5 N.D.
stress copper (II) chloride 2.5 mM N.D. N.D. N.D. -0.5 N.D.
nitrogen source Ammonium chloride (N) N.D. N.D. N.D. -0.5 N.D.
stress Doxycycline hyclate 0.0001 mg/ml N.D. N.D. N.D. -0.5 N.D.
carbon source D,L-Lactate (C) N.D. N.D. N.D. -0.4 N.D.
carbon source carbon source Sucrose 5mM N.D. N.D. N.D. -0.4 N.D.
nitrogen source Cytosine (N) N.D. N.D. N.D. -0.4 N.D.
nitrogen source L-Citrulline (N) N.D. N.D. N.D. +0.5 N.D.
stress sodium fluoride 12.5 mM N.D. N.D. N.D. +0.5 N.D.
carbon source Carnitine Hydrochloride (C) N.D. N.D. N.D. +0.5 N.D.
carbon source carbon source Sucrose 0.25mM N.D. N.D. N.D. +0.5 N.D.
carbon source D-Ribose (C) N.D. N.D. N.D. +0.5 N.D.
nitrogen source Uridine (N) N.D. N.D. N.D. +0.5 N.D.
carbon source Cytidine (C) N.D. N.D. N.D. +0.5 N.D.
anaerobic N2E2wt with N1B4m denitrifying repA N.D. N.D. N.D. +0.5 N.D.
stress Dimethyl Sulfoxide 5 vol% N.D. N.D. N.D. +0.5 N.D.
stress D-Cycloserine 0.1 mg/ml N.D. N.D. N.D. +0.5 N.D.
carbon source L-Glutamine (C) N.D. N.D. N.D. +0.6 N.D.
nitrogen source L-Leucine (N) N.D. N.D. N.D. +0.6 N.D.
nitrogen source Putrescine (N) N.D. N.D. N.D. +0.6 N.D.
temperature LB 37C N.D. N.D. N.D. +0.7 N.D.
pH Minimal media pH9 N.D. N.D. N.D. +0.7 N.D.
stress Fusidic 0.125 mg/ml N.D. N.D. N.D. +0.8 N.D.
nitrogen source L-Methionine (N) N.D. N.D. N.D. +0.8 N.D.
stress Aluminum chloride 2.5 mM N.D. N.D. N.D. +0.9 N.D.
anaerobic N2E2wt with N1B4m denitrifying repA N.D. N.D. N.D. +0.9 N.D.
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