Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_139 and Pf1N1B4_140 are separated by 43 nucleotidesPf1N1B4_140 and Pf1N1B4_141 are separated by 272 nucleotidesPf1N1B4_141 and Pf1N1B4_142 are separated by 210 nucleotidesPf1N1B4_142 and Pf1N1B4_143 are separated by 1567 nucleotides Pf1N1B4_139 - Pyoverdin biosynthesis protein PvdN, putative aminotransferase, class V, at 155,912 to 157,198 _139 Pf1N1B4_140 - PvdO, pyoverdine responsive serine/threonine kinase (predicted by OlgaV), at 157,242 to 158,129 _140 Pf1N1B4_141 - PvdE, pyoverdine ABC export system, fused ATPase and permease components, at 158,402 to 160,051 _141 Pf1N1B4_142 - TonB-dependent siderophore receptor precursor, at 160,262 to 162,742 _142 Pf1N1B4_143 - hypothetical protein, at 164,310 to 164,669 _143
Group Condition Pf1N1B4_139 Pf1N1B4_140 Pf1N1B4_141 Pf1N1B4_142 Pf1N1B4_143
carbon source carbon source Sucrose 0.25mM -3.5 +0.2 -0.1 +0.0 N.D.
temperature LB 37C -0.9 -0.5 -0.6 -0.3 N.D.
anaerobic N2E2wt with N1B4m denitrifying repA -1.7 -0.1 +0.0 -0.2 N.D.
stress Paraquat dichloride 0.016 mg/mL -0.8 -0.1 -1.0 +0.0 N.D.
temperature LB 37C -1.5 +0.0 +0.0 -0.3 N.D.
temperature LB 20C -0.2 -0.2 -1.3 +0.0 N.D.
temperature LB 10C -0.5 -0.1 -1.0 -0.2 N.D.
nophagecontrol Time16-nophage -0.5 +0.2 -1.1 -0.2 N.D.
stress 1-ethyl-3-methylimidazolium lysine 5 mM -1.0 -0.7 +0.2 -0.1 N.D.
stress Cobalt chloride 0.3125 mM -0.8 -0.5 -0.3 +0.1 N.D.
stress Thallium(I) acetate 0.008 mg/ml -0.2 -0.3 -1.1 +0.3 N.D.
carbon source carbon source Sucrose 5mM -0.6 -0.4 +0.1 -0.3 N.D.
phagefrs Time16-FRS -0.2 +0.3 -1.3 -0.0 N.D.
phagefrs Time16-FRS -0.2 +0.4 -1.4 +0.0 N.D.
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E3; replicate A -1.0 +0.2 +0.0 -0.2 N.D.
temperature LB 20C -0.0 +0.3 -1.2 +0.0 N.D.
anaerobic N2E2wt with N1B4m denitrifying repB -1.1 -0.0 +0.3 -0.1 N.D.
carbon source carbon source Sucrose 1mM -1.2 -0.1 +0.1 +0.3 N.D.
nophagecontrol Time16-nophage +0.3 +0.2 -1.2 -0.1 N.D.
nophagecontrol Time16-nophage +0.4 +0.1 -1.0 -0.2 N.D.
anaerobic N2E2wt with N1B4m denitrifying repA -1.0 +0.4 +0.2 +0.1 N.D.
stress Carbenicillin 2 mg/ml -0.6 -0.3 +0.4 +0.2 N.D.
stress Spectinomycin 0.05 mg/ml +1.1 -0.3 -0.8 -0.1 N.D.
stress Cisplatin 0.006 mg/ml +0.6 -0.8 +0.2 +0.1 N.D.
stress Thallium(I) acetate 0.008 mg/ml +0.5 +0.4 -1.1 +0.3 N.D.
stress Cisplatin 0.006 mg/ml +0.8 -0.7 +0.1 +0.2 N.D.
stress Chloride 200 mM +0.9 -0.3 +0.2 +0.2 N.D.
stress Chlorite 1 mM +0.8 +0.7 -0.3 -0.1 N.D.
anaerobic Nitrate reduction +1.1 -0.1 +0.1 +0.1 N.D.
stress Fusidic 0.0625 mg/ml +0.7 +0.4 +0.3 -0.0 N.D.
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