Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_1395 and Pf1N1B4_1396 are separated by 214 nucleotidesPf1N1B4_1396 and Pf1N1B4_1397 are separated by 191 nucleotidesPf1N1B4_1397 and Pf1N1B4_1398 are separated by 123 nucleotidesPf1N1B4_1398 and Pf1N1B4_1399 are separated by 19 nucleotides Pf1N1B4_1395 - FIG00958717: hypothetical protein, at 1,598,047 to 1,598,967 _1395 Pf1N1B4_1396 - Fe-S OXIDOREDUCTASE (1.8.-.-), at 1,599,182 to 1,601,485 _1396 Pf1N1B4_1397 - Replicative DNA helicase (EC 3.6.1.-), at 1,601,677 to 1,603,071 _1397 Pf1N1B4_1398 - LSU ribosomal protein L9p, at 1,603,195 to 1,603,641 _1398 Pf1N1B4_1399 - FIG003573: hypothetical protein, at 1,603,661 to 1,604,554 _1399
Group Condition Pf1N1B4_1395 Pf1N1B4_1396 Pf1N1B4_1397 Pf1N1B4_1398 Pf1N1B4_1399
temperature LB 10C -0.3 -0.0 N.D. N.D. -2.3
stress Spectinomycin 0.05 mg/ml +0.1 +0.2 N.D. N.D. -3.0
stress Spectinomycin 0.025 mg/ml -0.0 +0.3 N.D. N.D. -2.5
stress Sisomicin 0.001 mg/ml -0.1 -0.4 N.D. N.D. -1.3
temperature LB 10C +0.0 -0.1 N.D. N.D. -1.8
temperature LB 37C -0.5 -0.3 N.D. N.D. -0.7
pH Minimal media pH9 -0.3 +0.3 N.D. N.D. -1.5
stress Gentamicin 0.001 mg/ml -0.3 -0.1 N.D. N.D. -0.9
stress methylglyoxal 0.008 vol% -0.3 +0.1 N.D. N.D. -1.2
pH Minimal media pH9 -0.1 -0.0 N.D. N.D. -1.1
carbon source carbon source Sucrose 0.25mM -0.7 +0.1 N.D. N.D. -0.6
temperature LB 20C -0.2 +0.1 N.D. N.D. -1.1
stress Chloride 300 mM -0.2 -0.2 N.D. N.D. -0.7
carbon source carbon source Sucrose 1mM -0.0 -0.2 N.D. N.D. -0.9
stress Thallium(I) acetate 0.008 mg/ml -0.3 +0.1 N.D. N.D. -0.8
denitrifying Nitrate reduction, replicate A t2 +0.1 -0.4 N.D. N.D. -0.7
denitrifying Nitrate reduction, replicate C -0.1 -0.6 N.D. N.D. -0.2
temperature LB 30C -0.2 -0.4 N.D. N.D. -0.4
stress Choline chloride 200 mM +0.3 -0.0 N.D. N.D. -1.2
stress Cisplatin 0.006 mg/ml -0.3 +0.0 N.D. N.D. -0.6
stress Thallium(I) acetate 0.008 mg/ml -0.1 +0.3 N.D. N.D. -1.0
temperature LB 20C -0.0 +0.0 N.D. N.D. -0.9
lb LB +0.2 -0.3 N.D. N.D. -0.6
carbon source carbon source Sucrose 0.25mM +0.5 -0.5 N.D. N.D. -0.8
stress copper (II) chloride 2.5 mM -0.0 +0.4 N.D. N.D. -0.9
stress Tetracycline 0.0004 mg/ml +0.2 +0.2 N.D. N.D. -0.8
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1 +0.2 -0.5 N.D. N.D. +0.5
carbon source D-Trehalose (C) -0.4 +0.1 N.D. N.D. +0.6
anaerobic N2E2wt with N1B4m denitrifying repA +0.2 -0.1 N.D. N.D. +0.7
stress Carbenicillin 2 mg/ml -0.0 +0.3 N.D. N.D. +0.8
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