Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_1285 and Pf1N1B4_1286 overlap by 31 nucleotidesPf1N1B4_1286 and Pf1N1B4_1287 are separated by 307 nucleotidesPf1N1B4_1287 and Pf1N1B4_1288 are separated by 53 nucleotidesPf1N1B4_1288 and Pf1N1B4_1289 are separated by 12 nucleotides Pf1N1B4_1285 - Sensory box histidine kinase, at 1,464,887 to 1,467,664 _1285 Pf1N1B4_1286 - Probable transmembrane protein, at 1,467,634 to 1,469,559 _1286 Pf1N1B4_1287 - Phosphonate ABC transporter phosphate-binding periplasmic component (TC 3.A.1.9.1), at 1,469,867 to 1,470,424 _1287 Pf1N1B4_1288 - lipoprotein, putative, at 1,470,478 to 1,471,095 _1288 Pf1N1B4_1289 - 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64), at 1,471,108 to 1,471,857 _1289
Group Condition Pf1N1B4_1285 Pf1N1B4_1286 Pf1N1B4_1287 Pf1N1B4_1288 Pf1N1B4_1289
stress benzoic 0.58 mg/ml -0.5 -0.3 -0.3 +0.0 -0.1
nitrogen source nitrogen source nitrate 20mM -0.1 -0.2 -0.5 +0.1 -0.1
stress 1-ethyl-3-methylimidazolium chloride 80 mM -0.2 +0.0 -0.2 +0.2 -0.5
stress Carbenicillin 2 mg/ml +0.3 -0.1 -0.1 +0.0 -0.5
denitrifying Nitrate reduction, replicate A -0.0 +0.1 +0.3 -0.4 -0.2
carbon source carbon source Sucrose 1mM +0.5 -0.2 -0.4 +0.3 -0.5
carbon source octanoate (C) +0.3 -0.1 +0.1 -0.4 -0.2
denitrifying Nitrate reduction in presence of wild-type Pseudomonas N2-E2; replicate B +0.3 -0.2 -0.6 +0.2 +0.2
carbon source L-Alanine (C) +0.3 -0.0 +0.3 -0.1 -0.4
stress Benzethonium chloride 0.0125 mM +0.2 +0.1 -0.5 +0.5 -0.4
carbon source L-Malic (C) +0.3 -0.1 +0.3 -0.2 -0.2
carbon source Tween 20 (C) +0.4 +0.0 +0.1 -0.3 -0.2
stress Fusidic 0.125 mg/ml +0.4 +0.0 -0.5 -0.1 +0.2
anaerobic Nitrate reduction +0.1 -0.4 -0.2 +0.1 +0.5
nitrogen source L-Methionine (N) -0.3 +0.3 -0.1 +0.1 +0.2
nitrogen source L-Isoleucine (N) +0.2 -0.1 +0.4 -0.2 -0.0
stress Chloride 200 mM +0.5 +0.2 -0.2 +0.1 -0.3
carbon source carbon source Sucrose 5mM +0.0 -0.0 -0.4 +0.5 +0.2
carbon source carbon source Sucrose 1mM +0.2 -0.3 +0.1 +0.2 +0.3
anaerobic N2E2wt with N1B4m denitrifying repA +0.1 +0.1 -0.4 +0.1 +0.6
stress methylglyoxal 0.008 vol% -0.1 +0.1 +0.3 +0.4 -0.2
stress Dimethyl Sulfoxide 5 vol% +0.4 +0.2 +0.4 +0.1 -0.5
carbon source carbon source Sucrose 0.25mM +0.3 +0.2 -0.3 +0.7 -0.2
stress nitrate 100 mM +0.3 +0.1 +0.4 +0.3 -0.3
nitrogen source D-Alanine (N) +0.5 -0.1 +0.2 -0.0 +0.2
nitrogen source nitrogen source nitrate 5mM +0.3 -0.1 +0.2 +0.1 +0.3
nitrogen source nitrogen source nitrite 0.1mM -0.1 -0.3 +0.2 +0.4 +0.7
lb LB +0.3 -0.0 +0.5 +0.3 -0.1
carbon source Cytidine (C) +0.4 +0.0 +0.3 +0.2 +0.1
carbon source carbon source Sucrose 0.5mM +0.2 -0.1 -0.0 +0.7 +0.5
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