Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 191 experiments or choose conditions or try the comparative fitness browser

500 ntPf1N1B4_1242 and Pf1N1B4_1243 are separated by 614 nucleotidesPf1N1B4_1243 and Pf1N1B4_1244 are separated by 11 nucleotidesPf1N1B4_1244 and Pf1N1B4_1245 overlap by 1 nucleotidesPf1N1B4_1245 and Pf1N1B4_1246 are separated by 80 nucleotides Pf1N1B4_1242 - FIG000605: protein co-occurring with transport systems (COG1739), at 1,420,164 to 1,420,745 _1242 Pf1N1B4_1243 - ABC transporter ATP-binding protein, at 1,421,360 to 1,422,925 _1243 Pf1N1B4_1244 - Nucleoside ABC transporter, permease protein 1, at 1,422,937 to 1,424,043 _1244 Pf1N1B4_1245 - Nucleoside ABC transporter, permease protein 2, at 1,424,043 to 1,424,969 _1245 Pf1N1B4_1246 - FIG00954047: hypothetical protein, at 1,425,050 to 1,425,472 _1246
Group Condition Pf1N1B4_1242 Pf1N1B4_1243 Pf1N1B4_1244 Pf1N1B4_1245 Pf1N1B4_1246
carbon source carbon source Sucrose 1mM +0.8 -1.2 -1.3 +0.5 -4.0
anaerobic N2E2wt with N1B4m denitrifying repA -0.2 -0.2 +0.0 -0.8 -3.5
nitrogen source nitrogen source nitrite 1mM +0.3 -0.6 +0.0 -0.4 -1.5
nitrogen source Cytidine (N) -0.0 -0.8 -0.5 -0.3 -0.6
nitrogen source nitrogen source nitrite 0.1mM -0.6 -0.7 -0.3 +0.2 -0.5
carbon source carbon source Sucrose 0.5mM +0.5 -0.2 -0.6 -1.1 -0.5
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate C; timepoint 1 +0.0 -0.5 -0.1 +0.3 -1.2
denitrifying Denitrifying in presence of WT Pseudomonas N2-E3; replicate B; timepoint 1 +0.2 +0.3 -0.0 -0.1 -1.9
stress Carbenicillin 2 mg/ml +0.3 +0.1 -0.0 -0.5 -1.3
stress Spectinomycin 0.025 mg/ml +0.1 -0.4 +0.2 +0.0 -1.4
nitrogen source Cytosine (N) -0.1 -0.9 -0.3 -0.5 +0.8
nitrogen source nitrogen source nitrate 20mM +0.4 +0.4 -0.8 -0.1 -0.9
carbon source L-Alanine (C) +0.3 -0.4 +0.3 -0.4 -0.7
stress Cisplatin 0.006 mg/ml +0.2 +0.2 +0.3 -0.4 -0.9
denitrifying Nitrate reduction, replicate A +0.4 +0.3 -0.1 +0.2 -1.3
nitrogen source L-Methionine (N) -0.3 -1.1 +0.4 -0.1 +0.7
nitrogen source L-Isoleucine (N) +0.4 -0.3 +0.5 +0.1 -0.9
carbon source carbon source Sucrose 20mM -0.5 -0.0 +0.1 -0.5 +0.9
stress Cisplatin 0.006 mg/ml +0.9 -0.3 +0.2 -0.3 -0.6
lb LB -0.0 +0.5 -0.7 -0.2 +0.5
stress Chloride 300 mM -0.1 -0.6 +0.2 -0.3 +1.0
pH Minimal media pH9 -0.3 +0.5 +0.2 -0.3 +0.5
stress Cholin acetate 10 mM -0.0 +0.5 -0.2 -0.5 +0.8
stress Fusidic 0.125 mg/ml +0.5 -0.4 +0.3 +0.0 +0.8
carbon source Tween 20 (C) +0.5 -0.5 +0.1 +0.3 +0.9
nitrogen source nitrogen source nitrite 0.1mM +0.5 -0.0 +0.3 -0.2 +1.1
nitrogen source Uridine (N) -0.4 +0.5 +0.3 +0.6 +0.9
nitrogen source Ammonium chloride (N) +0.1 +0.4 +0.2 +0.6 +0.7
nitrogen source nitrate (N) -0.0 +0.3 +0.3 +0.6 +0.9
nitrogen source Thymine (N) +0.4 +0.8 +0.5 +0.3 +0.5
remove
Pf1N1B4_1242
plot		 remove
Pf1N1B4_1243
plot		 remove
Pf1N1B4_1244		 remove
Pf1N1B4_1245
plot		 remove
Pf1N1B4_1246
plot