Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_1159 and Pf1N1B4_1160 are separated by 3 nucleotidesPf1N1B4_1160 and Pf1N1B4_1161 are separated by 159 nucleotidesPf1N1B4_1161 and Pf1N1B4_1162 are separated by 27 nucleotidesPf1N1B4_1162 and Pf1N1B4_1163 are separated by 47 nucleotides Pf1N1B4_1159 - tRNA pseudouridine synthase B (EC 4.2.1.70), at 1,306,013 to 1,306,930 _1159 Pf1N1B4_1160 - Ribosome-binding factor A, at 1,306,934 to 1,307,335 _1160 Pf1N1B4_1161 - Translation initiation factor 2, at 1,307,495 to 1,310,020 _1161 Pf1N1B4_1162 - Transcription termination protein NusA, at 1,310,048 to 1,311,529 _1162 Pf1N1B4_1163 - FIG000325: clustered with transcription termination protein NusA, at 1,311,577 to 1,312,035 _1163
Group Condition Pf1N1B4_1159 Pf1N1B4_1160 Pf1N1B4_1161 Pf1N1B4_1162 Pf1N1B4_1163
carbon source carbon source Sucrose 0.5mM -2.0 N.D. N.D. N.D. N.D.
stress Sisomicin 0.001 mg/ml -2.0 N.D. N.D. N.D. N.D.
stress methylglyoxal 0.008 vol% -1.9 N.D. N.D. N.D. N.D.
stress sodium fluoride 12.5 mM -1.8 N.D. N.D. N.D. N.D.
carbon source D-Lactate (C) -1.7 N.D. N.D. N.D. N.D.
carbon source carbon source Sucrose 0.25mM -1.7 N.D. N.D. N.D. N.D.
stress Choline chloride 200 mM -1.7 N.D. N.D. N.D. N.D.
carbon source D-Lactate (C) -1.6 N.D. N.D. N.D. N.D.
carbon source carbon source Sucrose 1mM -1.6 N.D. N.D. N.D. N.D.
nitrogen source nitrogen source nitrite 0.5mM -1.6 N.D. N.D. N.D. N.D.
carbon source carbon source Sucrose 20mM -1.4 N.D. N.D. N.D. N.D.
stress Chloride 300 mM -1.4 N.D. N.D. N.D. N.D.
stress copper (II) chloride 2.5 mM -1.3 N.D. N.D. N.D. N.D.
nitrogen source nitrogen source Ammonium chloride 20mM -1.2 N.D. N.D. N.D. N.D.
nitrogen source nitrogen source nitrite 0.1mM -1.2 N.D. N.D. N.D. N.D.
denitrifying Nitrate reduction, replicate C -1.2 N.D. N.D. N.D. N.D.
carbon source carbon source Sucrose 5mM -1.2 N.D. N.D. N.D. N.D.
stress 5-Hydroxymethylfurfural 2.5 mM -1.2 N.D. N.D. N.D. N.D.
nitrogen source nitrogen source nitrite 0.1mM -1.2 N.D. N.D. N.D. N.D.
stress nitrite 10 mM -1.1 N.D. N.D. N.D. N.D.
carbon source D-Glucose (C) -1.1 N.D. N.D. N.D. N.D.
carbon source L-Alanine (C) -1.1 N.D. N.D. N.D. N.D.
carbon source acetate (C) -1.1 N.D. N.D. N.D. N.D.
carbon source L-Arabinose (C) -1.1 N.D. N.D. N.D. N.D.
stress Bacitracin 2 mg/ml -1.0 N.D. N.D. N.D. N.D.
carbon source carbon source Sucrose 0.25mM -1.0 N.D. N.D. N.D. N.D.
carbon source a-Ketoglutaric (C) -1.0 N.D. N.D. N.D. N.D.
stress 1-ethyl-3-methylimidazolium chloride 80 mM -1.0 N.D. N.D. N.D. N.D.
carbon source D-Mannose (C) +1.0 N.D. N.D. N.D. N.D.
temperature LB 37C +1.4 N.D. N.D. N.D. N.D.
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