Fitness for 5 genes in Pseudomonas fluorescens FW300-N1B4

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500 ntPf1N1B4_998 and Pf1N1B4_999 are separated by 25 nucleotidesPf1N1B4_999 and Pf1N1B4_1000 overlap by 11 nucleotidesPf1N1B4_1000 and Pf1N1B4_1001 are separated by 56 nucleotidesPf1N1B4_1001 and Pf1N1B4_1002 are separated by 286 nucleotides Pf1N1B4_998 - Membrane fusion component of tripartite multidrug resistance system, at 1,131,976 to 1,132,839 _998 Pf1N1B4_999 - Na+-dependent transporters of the SNF family, at 1,132,865 to 1,133,065 _999 Pf1N1B4_1000 - Inner membrane component of tripartite multidrug resistance system, at 1,133,055 to 1,135,343 _1000 Pf1N1B4_1001 - Outer membrane component of tripartite multidrug resistance system, at 1,135,400 to 1,136,899 _1001 Pf1N1B4_1002 - LysR family transcriptional regulator QseA, at 1,137,186 to 1,138,154 _1002
Group Condition Pf1N1B4_998 Pf1N1B4_999 Pf1N1B4_1000 Pf1N1B4_1001 Pf1N1B4_1002
stress Cholin acetate 20 mM -0.9 -0.5 -0.6 -0.7 +0.1
temperature LB 37C -1.3 -0.2 +0.2 -0.1 -0.2
anaerobic Nitrate reduction -0.3 -0.5 -0.2 -0.2 -0.2
carbon source carbon source Sucrose 1mM -0.8 +0.0 -0.2 +0.2 -0.3
anaerobic Nitrate reduction -0.4 -0.5 -0.1 +0.2 -0.3
carbon source carbon source Sucrose 0.25mM -0.5 +0.7 -0.4 +0.4 -0.6
stress copper (II) chloride 2.5 mM +0.2 +0.0 -0.1 -0.8 +0.2
pH Minimal media pH6 -0.6 +0.4 +0.0 +0.1 -0.3
carbon source carbon source Sucrose 0.25mM -0.5 +0.5 +0.3 -0.1 -0.4
stress 1-ethyl-3-methylimidazolium chloride 80 mM -0.4 +0.5 -0.0 +0.2 -0.5
stress nitrite 10 mM -0.1 +0.4 +0.1 -0.2 -0.5
stress nitrite 10 mM +0.3 +0.6 +0.0 +0.2 -1.3
stress nitrate 100 mM -0.2 +0.3 +0.1 +0.2 -0.5
carbon source octanoate (C) +0.2 -0.1 -0.2 -0.5 +0.6
carbon source L-Alanine (C) +0.3 -0.5 +0.2 +0.2 +0.1
carbon source L-Malic (C) +0.5 -0.5 +0.0 +0.1 +0.1
stress Aluminum chloride 2.5 mM +0.9 +0.0 -0.0 -0.1 -0.4
lb LB +0.6 +0.1 +0.2 -0.4 +0.0
stress Fusidic 0.0625 mg/ml +0.3 -0.0 +0.3 +0.3 -0.4
stress Cisplatin 0.006 mg/ml -0.1 +0.6 +0.1 +0.5 -0.3
carbon source L-Leucine (C) +0.9 -0.3 +0.1 -0.0 +0.2
stress benzoic 0.58 mg/ml +0.6 +0.2 +0.1 +0.3 -0.2
nitrogen source L-Methionine (N) +0.7 -0.5 +0.1 +0.6 +0.0
stress Dimethyl Sulfoxide 5 vol% +0.9 -0.1 +0.2 +0.2 -0.0
carbon source carbon source Sucrose 5mM +0.6 +0.4 +0.3 +0.1 -0.1
nitrogen source L-Leucine (N) +0.9 +0.1 +0.1 +0.2 -0.0
stress Fusidic 0.125 mg/ml +0.7 -0.0 -0.0 +0.4 +0.3
carbon source butyrate (C) +1.9 +1.4 +1.4 +1.2 +1.6
carbon source acetate (C) +1.9 +1.4 +1.8 +1.8 +1.3
carbon source acetate (C) +2.1 +1.5 +1.8 +1.9 +1.3
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