Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS13025 and PFLU_RS13030 are separated by 11 nucleotidesPFLU_RS13030 and PFLU_RS31585 are separated by 961 nucleotidesPFLU_RS31585 and PFLU_RS13035 are separated by 248 nucleotidesPFLU_RS13035 and PFLU_RS13040 are separated by 3 nucleotides PFLU_RS13025: PFLU_RS13025 - CbtA family protein, at 2,942,099 to 2,942,803 _RS13025 PFLU_RS13030: PFLU_RS13030 - cobalt transporter, at 2,942,815 to 2,943,003 _RS13030 PFLU_RS31585: PFLU_RS31585 - hypothetical protein, at 2,943,965 to 2,944,225 _RS31585 PFLU_RS13035: PFLU_RS13035 - cobalamin biosynthesis protein CobW, at 2,944,474 to 2,945,535 _RS13035 PFLU_RS13040: PFLU_RS13040 - cobaltochelatase subunit CobN, at 2,945,539 to 2,949,300 _RS13040
Group Condition PFLU_RS13025 PFLU_RS13030 PFLU_RS31585 PFLU_RS13035 PFLU_RS13040
carbon source NAG (C) -0.8 -1.0 -0.0 -3.5 -2.1
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS -0.8 -0.4 -0.1 -2.5 -2.0
no stress control Glycine betaine (C)(N); with TAPS +0.2 -1.0 -0.2 -3.1 -1.6
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.2 -0.4 -0.2 -3.1 -1.6
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.1 -0.6 -0.3 -2.3 -2.0
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.2 +0.4 -0.3 -2.7 -2.5
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.2 -0.3 -0.3 -2.3 -1.9
carbon source L-Malic (C) -0.2 -0.1 -0.3 -2.8 -1.5
stress Betaine (C)(N); with MOPS; with chloride +0.1 -1.0 -0.3 -2.5 -1.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.1 -0.9 -0.1 -1.6 -2.1
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS -0.2 -0.1 +0.1 -2.4 -2.3
temperature shift Temperature shift 30_to_25; with MOPS -0.4 +0.3 -0.0 -4.0 -0.7
stress Betaine (C)(N); with TAPS; with chloride -0.5 -0.3 -0.3 -2.3 -1.3
carbon and nitrogen source NAG carbon and (N) -0.1 +0.5 +0.5 -3.6 -1.7
carbon source NAG (C) +0.2 -0.9 +0.2 -2.2 -1.7
carbon source L-Arabinose (C) +0.1 -1.3 -0.1 -1.7 -1.5
carbon source D,L-Malic Acid (C) +0.3 -0.3 +0.0 -2.3 -1.9
carbon source Phloretic Acid 2 mM (C) -0.6 -1.2 +0.7 -2.4 -0.6
stress Betaine (C)(N); with MOPS; with chloride +0.3 -1.3 +0.1 -2.1 -1.2
nitrogen source NAG (N); with MOPS +0.4 -1.2 +0.1 -2.2 -1.1
pH Growth at pH7 and (C) D-Glucose +0.3 -0.6 -0.3 -2.3 -1.2
carbon source NAG (C) -0.9 -0.3 +0.3 -1.3 -1.6
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.2 +0.5 +0.1 -2.5 -1.8
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.2 +0.8 -0.3 -2.3 -1.7
carbon source 4-Hydroxybenzoic Acid 2 mM (C) +0.3 -0.2 +0.2 -2.0 -1.7
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.6 +0.8 +0.2 -2.2 -1.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.2 +0.7 +0.4 -2.3 -2.0
stress Betaine (C)(N); with MOPS; with chloride -0.8 +0.8 -0.0 -2.3 -0.6
stress Glucose (C) and L-Glutamine (N); with MOPS; with chloride +0.6 +0.0 +0.1 -2.1 -1.5
carbon source Phloretic Acid 2 mM (C) +0.9 +0.5 +0.5 -2.5 -0.3
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