Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	PFLU_RS01060	PFLU_RS01065	PFLU_RS31370	PFLU_RS01070	PFLU_RS01075
carbon source	Xanthosine (C)	+0.0	-0.7	+0.3	-1.9	-0.7
carbon source	NAG (C)	+0.0	-1.2	+0.2	-1.9	-0.1
carbon and nitrogen source	NAG carbon and (N)	-0.7	-0.2	-0.0	-1.9	+0.0
no stress control	L-Glutamine (C)(N); with TAPS	-0.4	+0.1	-0.7	-1.1	-0.5
no stress control	p-Coumaric (C) and Ammonium chloride (N); with MOPS	-0.2	-0.3	-0.3	-1.5	-0.3
carbon source	2-Keto-D-gluconic hemicalcium salt (C)	-0.3	-0.5	-0.0	-1.4	-0.3
carbon source	Ferulic Acid (C) 1.5 mM	-0.7	-0.4	-0.7	-0.6	+0.0
stress	D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride	+0.1	-1.3	-0.0	-0.8	-0.2
pH	Growth at pH6 and (C) D-Glucose	+0.1	+0.0	-0.5	-1.8	-0.0
pH	Growth at pH9 and (C) Trisodium citrate	+0.5	-1.4	-0.2	-0.7	-0.2
carbon source	D,L-Malic Acid (C)	-0.0	-0.8	-0.5	-0.8	+0.3
stress	Betaine (C)(N); with MOPS; with chloride	+0.3	-0.7	-0.2	-0.3	-0.8
stress	Betaine (C)(N); with MOPS; with chloride	-0.1	+0.4	-0.7	-1.1	-0.1
stress	Betaine (C)(N); with MOPS; with chloride	+0.2	+0.2	-0.8	-0.9	-0.4
no stress control	Glycine betaine (C)(N); with TAPS	-0.6	-0.5	-0.0	-0.8	+0.4
no stress control	Glucose (C) and nitrate (N); with TAPS	+0.4	-0.3	+0.2	-1.4	-0.2
stress	D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride	-0.1	-0.9	+0.6	-0.8	+0.1
carbon source	Glycerol (C)	+0.2	+0.4	+0.3	-1.9	-0.0
nitrogen source	NAG (N); with MOPS	+0.0	+0.5	+0.2	-1.6	-0.2
soil	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs	-0.6	+0.6	+0.3	-0.9	+0.1
stress	D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride	+0.3	-1.4	-0.3	+0.9	+0.3
carbon source	L-Valine (C)	+0.2	+1.1	+0.3	-1.5	-0.1
carbon source	Phloretic Acid 2 mM (C)	+0.6	+0.8	-0.5	-0.7	-0.2
pH	Growth at pH8 and (C) Trisodium citrate	+0.5	+0.6	+0.8	-1.8	+0.1
carbon source	L-Valine 10 mM (C)	+0.9	-0.7	-0.4	+0.8	-0.0
carbon source	Inosine (C)	-0.5	+0.9	-0.4	+0.7	+0.2
stress	D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride	-0.2	+0.3	+0.5	+0.8	-0.6
no stress control	p-Coumaric (C) and Ammonium chloride (N); with MOPS	-0.0	-0.6	+0.2	+1.6	-0.1
carbon source	L-Carnitine (C)	+0.3	-0.7	+0.4	+0.6	+0.6
stress	Glucose (C) and Ammonium chloride (N); with MOPS; with chloride	+0.5	+0.7	-0.1	+0.9	-0.3