Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS30975 and PFLU_RS20235 are separated by 186 nucleotidesPFLU_RS20235 and PFLU_RS31310 are separated by 1307 nucleotidesPFLU_RS31310 and PFLU_RS20245 are separated by 11 nucleotidesPFLU_RS20245 and PFLU_RS20250 overlap by 10 nucleotides PFLU_RS30975: PFLU_RS30975 - acyltransferase, at 4,577,049 to 4,578,965 _RS30975 PFLU_RS20235: PFLU_RS20235 - tail fiber assembly protein, at 4,579,152 to 4,579,496 _RS20235 PFLU_RS31310: PFLU_RS31310 - phage tail protein, at 4,580,804 to 4,581,001 _RS31310 PFLU_RS20245: PFLU_RS20245 - DUF2313 domain-containing protein, at 4,581,013 to 4,581,612 _RS20245 PFLU_RS20250: PFLU_RS20250 - baseplate J/gp47 family protein, at 4,581,603 to 4,582,262 _RS20250
Group Condition PFLU_RS30975 PFLU_RS20235 PFLU_RS31310 PFLU_RS20245 PFLU_RS20250
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.5 +0.0 -4.5 +0.2 -0.3
temperature shift Temperature shift 30_to_25; with MOPS +0.1 +0.2 -5.1 -0.2 +0.1
carbon source p-Coumaric 2 mM (C) -0.2 -0.2 -4.5 +0.2 -0.1
carbon source Shikimic Acid (C) -0.0 -0.3 -3.0 -1.1 -0.1
carbon source L-Valine 10 mM (C) -0.5 -0.4 -2.4 -0.8 -0.2
no stress control L-Glutamine (C)(N); with TAPS -0.2 +0.0 -3.2 -0.1 -0.1
carbon source 4-Acetoxy-3-methoxycinnamic 2 mM (C) +0.3 -0.4 -3.4 -0.1 +0.0
stress L-Glutamine (C)(N); with MOPS; with chloride -0.3 -0.1 -2.2 -0.5 -0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.5 -0.2 -2.2 -0.6 +0.1
carbon source acetate (C) +0.1 -0.3 -2.6 -0.1 -0.3
temperature Growth at 25C; with MOPS +0.3 -0.2 -3.2 +0.1 +0.1
no stress control Betaine (C)(N); with TAPS +0.2 -0.0 -3.3 +0.3 -0.1
no stress control Growth with no stress; with MOPS -0.1 +0.2 -3.0 +0.0 +0.1
carbon source Inosine (C) +0.4 +0.1 -3.7 -0.0 +0.3
pH Growth at pH9 and (C) Trisodium citrate +0.2 +0.4 -2.9 -0.6 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.0 -0.3 -2.6 +0.3 -0.1
carbon source L-Valine (C) +0.1 +0.3 -2.2 -0.8 -0.1
carbon source NAG (C) -0.1 -0.0 -2.6 -0.2 +0.2
stress L-Glutamine (C)(N); with TAPS; with chloride -0.0 +0.1 -2.8 +0.2 -0.1
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.1 -0.2 -2.6 -0.2 +0.4
carbon source L-Carnitine (C) +0.2 +0.2 -2.5 -0.4 +0.3
carbon source Cytidine 10 mM (C) +0.4 -0.2 -1.5 -0.9 +0.2
pH Growth at pH6 and (C) D-Glucose +0.1 -0.3 -2.2 +0.5 +0.1
stress Glucose (C) and L-Glutamine (N); with MOPS; with chloride +0.2 +0.3 -2.3 +0.1 -0.1
temperature Growth at 25C +0.1 -0.1 -2.4 +0.3 +0.4
no stress control D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS +0.4 +0.1 -2.3 +0.3 +0.0
no stress control Glycine betaine (C)(N); with MOPS +0.3 -0.4 -1.9 +0.6 +0.1
carbon source Phloretic Acid 2 mM (C) -0.4 -0.3 +2.2 -0.4 +0.0
stress malate (C) and Ammonium chloride (N); with MOPS; with PEG +2.4 +0.0 -0.5 -0.1 +0.1
carbon source L-Carnitine (C) +0.4 +0.1 +1.6 +0.5 -0.4
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