Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS12135 and PFLU_RS30710 are separated by 41 nucleotidesPFLU_RS30710 and PFLU_RS30715 are separated by 61 nucleotidesPFLU_RS30715 and PFLU_RS12140 are separated by 148 nucleotidesPFLU_RS12140 and PFLU_RS12145 are separated by 194 nucleotides PFLU_RS12135: PFLU_RS12135 - hypothetical protein, at 2,693,185 to 2,693,568 _RS12135 PFLU_RS30710: PFLU_RS30710 - GNAT family N-acetyltransferase, at 2,693,610 to 2,693,816 _RS30710 PFLU_RS30715: PFLU_RS30715 - hypothetical protein, at 2,693,878 to 2,694,228 _RS30715 PFLU_RS12140: PFLU_RS12140 - hypothetical protein, at 2,694,377 to 2,694,721 _RS12140 PFLU_RS12145: PFLU_RS12145 - nuclear transport factor 2 family protein, at 2,694,916 to 2,695,176 _RS12145
Group Condition PFLU_RS12135 PFLU_RS30710 PFLU_RS30715 PFLU_RS12140 PFLU_RS12145
no stress control L-Glutamine (C)(N); with MOPS -0.8 -1.4 +0.3 -0.7 -4.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.1 -0.7 -0.3 -0.2 -4.2
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.4 -0.3 -0.2 -1.0 -3.9
carbon source Shikimic Acid (C) -0.4 +0.4 -0.5 -0.4 -4.0
carbon source D-(+)-Galactosamine (C) -0.9 -0.2 -0.1 -0.2 -3.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.0 -0.7 -1.1 -0.3 -2.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.4 -0.3 +0.2 +0.2 -4.2
carbon source Inosine 10 mM (C) +0.1 +0.5 -0.3 -0.2 -4.4
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.3 +0.4 +0.1 -0.3 -3.0
stress Betaine (C)(N); with TAPS; with chloride -0.7 -0.6 +0.4 -0.3 -2.7
carbon source L-Valine (C) -1.0 -1.0 -0.1 -0.1 -1.5
carbon source m-Inositol (C) +0.3 +0.1 +0.2 +0.0 -4.2
carbon source Xanthosine (C) +0.4 -0.4 +0.4 -0.2 -3.8
carbon source 4-Aminobutyric (C) -0.2 -0.4 -0.3 +0.5 -3.0
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.9 -0.6 +0.6 -0.2 -2.2
nitrogen source Ammonium chloride (N); with MOPS -0.1 +0.2 +0.2 -0.3 -3.2
carbon and nitrogen source NAG carbon and (N) +0.2 -0.3 +0.1 +0.1 -3.2
nitrogen source nitrate (N) -0.5 -0.1 +0.2 +0.2 -2.8
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.2 -0.5 +0.2 +0.1 -2.7
carbon source L-Carnitine (C) +0.5 -1.4 -0.5 -0.3 -1.2
nitrogen source NAG (N); with MOPS -1.3 +0.4 -1.0 +0.1 -1.0
carbon source m-Inositol (C) +0.1 +0.7 +0.3 +0.4 -4.3
carbon source L-Arabinose (C) -0.5 +0.1 +0.4 -0.1 -2.6
carbon source Inosine (C) +0.5 -0.8 +0.7 +0.3 -3.4
stress Betaine (C)(N); with TAPS; with chloride +0.2 -1.0 +0.5 -0.1 -2.2
carbon source caffeic 2 mM (C) +0.7 +0.0 -0.8 -0.3 -2.1
no stress control L-Glutamine (C)(N); with TAPS -0.7 +0.7 +0.4 +0.1 -2.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.5 +0.7 +0.6 +0.0 -2.7
pH Growth at pH9 and (C) Trisodium citrate -0.5 -1.6 +0.5 -0.5 +0.5
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.5 -0.2 +0.5 +0.3 -2.5
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