Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS30095 and PFLU_RS30100 are separated by 60 nucleotidesPFLU_RS30100 and PFLU_RS30105 are separated by 10 nucleotidesPFLU_RS30105 and PFLU_RS30110 are separated by 227 nucleotidesPFLU_RS30110 and PFLU_RS30115 are separated by 123 nucleotides PFLU_RS30095: PFLU_RS30095 - hypothetical protein, at 6,697,146 to 6,697,523 _RS30095 PFLU_RS30100: PFLU_RS30100 - glutamine--fructose-6-phosphate transaminase (isomerizing), at 6,697,584 to 6,699,416 _RS30100 PFLU_RS30105: PFLU_RS30105 - DeoR family transcriptional regulator, at 6,699,427 to 6,700,194 _RS30105 PFLU_RS30110: PFLU_RS30110 - UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase, at 6,700,422 to 6,701,789 _RS30110 PFLU_RS30115: PFLU_RS30115 - F0F1 ATP synthase subunit epsilon, at 6,701,913 to 6,702,329 _RS30115
Group Condition PFLU_RS30095 PFLU_RS30100 PFLU_RS30105 PFLU_RS30110 PFLU_RS30115
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.0 N.D. -2.5 N.D. N.D.
pH Growth at pH8 and (C) Trisodium citrate -0.2 N.D. -2.2 N.D. N.D.
no stress control L-Glutamine (C)(N); with MOPS -0.5 N.D. -1.6 N.D. N.D.
carbon and nitrogen source NAG carbon and (N) +0.1 N.D. -2.2 N.D. N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.0 N.D. -2.0 N.D. N.D.
temperature Growth at 10C; with MOPS -0.1 N.D. -1.8 N.D. N.D.
carbon source L-Arabinose (C); with MOPS +0.1 N.D. -2.0 N.D. N.D.
stress Glucose (C) and Betaine (N); with TAPS; with chloride -0.0 N.D. -1.8 N.D. N.D.
carbon source Inosine (C) +0.0 N.D. -1.9 N.D. N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.2 N.D. -1.9 N.D. N.D.
pH Growth at pH8 and (C) D-Glucose -0.3 N.D. -1.5 N.D. N.D.
no stress control L-Glutamine (C)(N); with TAPS -0.1 N.D. -1.6 N.D. N.D.
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS +0.1 N.D. -1.8 N.D. N.D.
carbon source L-Carnitine (C) +0.4 N.D. -2.1 N.D. N.D.
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.2 N.D. -1.4 N.D. N.D.
carbon source Xanthosine 10 mM (C) -0.5 N.D. -1.2 N.D. N.D.
no stress control Glucose (C) and Betaine (N); with TAPS -0.4 N.D. -1.3 N.D. N.D.
carbon source L-Carnitine (C) -0.0 N.D. -1.6 N.D. N.D.
pH Growth at pH9 and (C) Trisodium citrate +0.7 N.D. -2.2 N.D. N.D.
carbon source L-Arabinose (C); with MOPS -0.2 N.D. -1.2 N.D. N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.0 N.D. -1.4 N.D. N.D.
stress Betaine (C)(N); with MOPS; with chloride -0.5 N.D. -0.8 N.D. N.D.
stress Betaine (C)(N); with TAPS; with chloride +0.1 N.D. -1.4 N.D. N.D.
pH Growth at pH6 and (C) D-Glucose -0.4 N.D. -0.9 N.D. N.D.
pH Growth at pH7 and (C) Trisodium citrate +0.1 N.D. -1.2 N.D. N.D.
carbon source D-Xylose (C) +0.2 N.D. -1.3 N.D. N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 N.D. -1.3 N.D. N.D.
carbon source Shikimic Acid (C) +0.3 N.D. -1.1 N.D. N.D.
no stress control Glycine betaine (C)(N); with TAPS +0.4 N.D. -1.2 N.D. N.D.
no stress control Glycine betaine (C)(N); with MOPS +0.1 N.D. +1.7 N.D. N.D.
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