Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1213 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS30015 and PFLU_RS30020 are separated by 87 nucleotidesPFLU_RS30020 and PFLU_RS30025 overlap by 10 nucleotidesPFLU_RS30025 and PFLU_RS30030 are separated by 65 nucleotidesPFLU_RS30030 and PFLU_RS30035 are separated by 117 nucleotides PFLU_RS30015: PFLU_RS30015 - class I SAM-dependent methyltransferase, at 6,673,721 to 6,674,905 _RS30015 PFLU_RS30020: PFLU_RS30020 - hypothetical protein, at 6,674,993 to 6,675,781 _RS30020 PFLU_RS30025: PFLU_RS30025 - DUF692 domain-containing protein, at 6,675,772 to 6,676,617 _RS30025 PFLU_RS30030: PFLU_RS30030 - membrane protein, at 6,676,683 to 6,676,934 _RS30030 PFLU_RS30035: PFLU_RS30035 - cadmium-translocating P-type ATPase, at 6,677,052 to 6,678,938 _RS30035
Group Condition PFLU_RS30015 PFLU_RS30020 PFLU_RS30025 PFLU_RS30030 PFLU_RS30035
carbon source L-Lysine (C) -0.2 -0.1 -0.2 -4.4 -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.7 +0.1 +0.1 -4.5 +0.1
carbon source D-Xylose (C) -0.1 +0.1 +0.0 -4.4 -0.1
carbon source Phloretic Acid 2 mM (C) -0.5 -0.2 +0.2 -3.8 -0.1
carbon source succinate (C); with MOPS -0.1 -0.3 +0.0 -4.2 +0.1
carbon and nitrogen source NAG carbon and (N) +0.1 -0.2 -0.1 -4.2 +0.0
stress Betaine (C)(N); with MOPS; with chloride -0.6 +0.3 -0.1 -4.1 +0.2
stress Betaine (C)(N); with TAPS; with chloride -0.2 -0.1 -0.0 -3.9 -0.1
nitrogen source nitrate (N); with MOPS +0.2 +0.1 -0.2 -4.4 +0.1
no stress control Glycine betaine (C)(N); with MOPS +0.0 +0.4 +0.1 -4.3 -0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -1.5 -0.2 -0.0 -2.2 -0.0
carbon source m-Inositol 10 mM (C) -0.0 +0.1 -0.1 -3.8 +0.0
carbon source p-Coumaric (C) 5 mM +0.4 +0.1 -0.3 -4.0 -0.1
carbon source Choline chloride 10 mM (C) +0.3 -0.1 +0.1 -3.7 -0.0
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.2 -0.0 +0.1 -3.2 -0.2
stress Sucrose (C) and Glycine betaine (N); with TAPS; with PEG -0.1 -0.2 +0.1 -2.9 -0.1
carbon source L-Carnitine (C) -0.2 +0.0 -0.2 -2.8 -0.1
stress Betaine (C)(N); with TAPS; with chloride -0.4 -0.1 -0.1 -2.4 -0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.5 +0.3 +0.3 -4.2 -0.0
temperature Growth at 25C; with MOPS -0.1 -0.1 +0.1 -2.9 -0.1
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.2 +0.1 -0.0 -1.6 -0.3
carbon source L-Valine 10 mM (C) +0.9 -0.2 -0.1 -3.5 +0.1
stress Glucose (C) and Glycine betaine (N); with TAPS; with chloride -0.1 +0.1 +0.0 -2.9 +0.0
pH Growth at pH7 and (C) D-Glucose +0.4 -0.1 -0.1 -2.7 -0.0
no stress control p-Coumaric (C) and Ammonium chloride (N); with MOPS -0.1 +0.0 +0.1 -2.7 +0.1
carbon source L-Ornithine (C) +0.2 +0.1 -0.1 -2.5 -0.1
no stress control Ferulic (C) and Ammonium chloride (N); with MOPS -1.0 +0.2 +0.1 -1.7 +0.1
no stress control Growth with no stress +0.1 +0.1 -0.1 -2.6 +0.2
carbon source D-Glucosamine Hydrochloride 10 mM (C) +0.2 -0.1 +0.2 -2.3 -0.2
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.8 +0.1 +0.1 -2.3 -0.1
remove
PFLU_RS30015
plot		 remove
PFLU_RS30020
plot		 remove
PFLU_RS30025		 remove
PFLU_RS30030
plot		 remove
PFLU_RS30035
plot