Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS29985 and PFLU_RS29990 overlap by 4 nucleotidesPFLU_RS29990 and PFLU_RS29995 overlap by 4 nucleotidesPFLU_RS29995 and PFLU_RS30000 are separated by 3 nucleotidesPFLU_RS30000 and PFLU_RS30005 overlap by 4 nucleotides PFLU_RS29985: PFLU_RS29985 - metal ABC transporter substrate-binding protein, at 6,668,314 to 6,669,192 _RS29985 PFLU_RS29990: PFLU_RS29990 - phosphoribosyl-AMP cyclohydrolase, at 6,669,189 to 6,669,602 _RS29990 PFLU_RS29995: PFLU_RS29995 - carbonate dehydratase, at 6,669,599 to 6,670,159 _RS29995 PFLU_RS30000: PFLU_RS30000 - dihydroorotase, at 6,670,163 to 6,671,500 _RS30000 PFLU_RS30005: PFLU_RS30005 - DUF3617 domain-containing protein, at 6,671,497 to 6,672,018 _RS30005
Group Condition PFLU_RS29985 PFLU_RS29990 PFLU_RS29995 PFLU_RS30000 PFLU_RS30005
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.6 -3.8 -0.7 +0.1 +0.4
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.5 -2.4 -0.4 -0.3 -0.3
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.3 -3.0 -0.3 -0.0 +0.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.3 -2.7 -0.8 +0.2 -0.0
stress Glucose (C) and Betaine (N); with TAPS; with chloride -0.7 -2.2 -0.3 -0.0 -0.2
pH Growth at pH9 and (C) D-Glucose -0.7 -0.9 -0.8 +0.0 -1.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.2 -2.2 -0.7 -0.2 -0.1
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.4 -2.7 -0.2 +0.1 +0.2
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.6 -1.8 -0.3 +0.1 -0.2
stress Glucose (C) and Betaine (N); with TAPS; with chloride -0.3 -1.9 -0.6 +0.2 +0.3
stress Betaine (C)(N); with MOPS; with chloride -0.8 -1.4 -0.6 +0.1 +0.5
no stress control Glycine betaine (C)(N); with MOPS +0.3 -1.4 +0.3 -0.2 -1.0
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -0.8 -0.5 -1.2 +0.2 +0.3
pH Growth at pH9 and (C) Trisodium citrate -0.5 -1.6 -0.3 -0.2 +0.6
carbon source NAG (C) -0.4 -1.0 -0.8 +0.3 +0.5
carbon source L-Ornithine 10 mM (C) -0.1 -1.7 -0.6 +0.4 +0.7
carbon source L-Ornithine (C) +0.4 -1.6 -0.6 +0.8 +0.2
stress Betaine (C)(N); with MOPS; with chloride -0.2 -1.6 +0.6 +0.0 +0.9
carbon source L-Valine 10 mM (C) +0.0 +2.1 -0.5 +0.0 -0.6
carbon source L-Valine (C) +0.4 +1.8 -0.3 -0.1 -0.6
carbon source L-Valine 10 mM (C) +0.5 +2.2 +0.4 -0.0 -0.3
carbon source Citraconic 20 mM (C) +0.9 +2.0 +0.7 +0.0 -0.2
carbon source Ferulic Acid (C) 1.5 mM +0.9 +2.6 +0.3 -0.2 -0.2
carbon source Citraconic 20 mM (C) +0.8 +2.3 +0.7 -0.1 -0.0
carbon source Ferulic Acid (C) 1.5 mM +1.2 +3.1 +0.3 -0.3 -0.2
carbon source Citraconic 20 mM (C) +1.1 +2.3 +1.1 -0.1 -0.1
carbon source p-Coumaric (C) 5 mM +2.6 +5.2 +0.9 -0.1 -0.2
carbon source p-Coumaric (C) 5 mM +2.8 +5.3 +0.6 -0.3 +0.1
carbon source p-Coumaric (C) 5 mM +2.8 +5.5 +0.8 -0.2 +0.1
carbon source p-Coumaric (C) 5 mM +2.7 +5.2 +0.9 +0.2 +0.3
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