Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS29520 and PFLU_RS29525 are separated by 125 nucleotidesPFLU_RS29525 and PFLU_RS29530 are separated by 186 nucleotidesPFLU_RS29530 and PFLU_RS29535 are separated by 6 nucleotidesPFLU_RS29535 and PFLU_RS29540 overlap by 4 nucleotides PFLU_RS29520: PFLU_RS29520 - hypothetical protein, at 6,552,226 to 6,552,969 _RS29520 PFLU_RS29525: PFLU_RS29525 - SDR family oxidoreductase, at 6,553,095 to 6,553,946 _RS29525 PFLU_RS29530: PFLU_RS29530 - tonB-system energizer ExbB, at 6,554,133 to 6,555,101 _RS29530 PFLU_RS29535: PFLU_RS29535 - TonB system transport protein ExbD, at 6,555,108 to 6,555,533 _RS29535 PFLU_RS29540: PFLU_RS29540 - energy transducer TonB, at 6,555,530 to 6,556,279 _RS29540
Group Condition PFLU_RS29520 PFLU_RS29525 PFLU_RS29530 PFLU_RS29535 PFLU_RS29540
pH Growth at pH7 and (C) D-Glucose -1.0 -0.0 N.D. N.D. N.D.
stress Betaine (C)(N); with MOPS; with chloride -1.0 +0.0 N.D. N.D. N.D.
carbon source NAG (C) -0.7 -0.3 N.D. N.D. N.D.
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.8 -0.1 N.D. N.D. N.D.
carbon source L-Arabinose (C) -0.8 -0.0 N.D. N.D. N.D.
carbon source L-Arabinose (C) -0.8 +0.0 N.D. N.D. N.D.
carbon source D,L-Malic Acid (C) -0.4 -0.4 N.D. N.D. N.D.
carbon source L-Arabinose (C) -0.7 -0.0 N.D. N.D. N.D.
temperature Growth at 30C; with MOPS -0.5 -0.3 N.D. N.D. N.D.
carbon source acetate 30 mM (C) -0.7 +0.0 N.D. N.D. N.D.
stress Betaine (C)(N); with TAPS; with chloride -0.8 +0.1 N.D. N.D. N.D.
nitrogen source Urea (N); with MOPS -0.6 -0.1 N.D. N.D. N.D.
pH Growth at pH7 and (C) D-Glucose -0.5 -0.1 N.D. N.D. N.D.
carbon and nitrogen source NAG carbon and (N); with MOPS -0.6 +0.0 N.D. N.D. N.D.
nitrogen source Urea (N) -0.6 +0.1 N.D. N.D. N.D.
no stress control Growth with no stress; with MOPS -0.6 +0.1 N.D. N.D. N.D.
pH Growth at pH6 and (C) D-Glucose -0.6 +0.1 N.D. N.D. N.D.
carbon source propionate 20 mM (C) -0.7 +0.1 N.D. N.D. N.D.
stress Betaine (C)(N); with TAPS; with chloride -0.6 +0.1 N.D. N.D. N.D.
carbon source acetate 30 mM (C) -0.6 +0.1 N.D. N.D. N.D.
carbon source L-Isoleucine (C) -0.6 +0.1 N.D. N.D. N.D.
pH Growth at pH6 and (C) D-Glucose -0.6 +0.1 N.D. N.D. N.D.
carbon source L-Lysine (C) -0.5 +0.1 N.D. N.D. N.D.
nitrogen source Urea (N) -0.5 +0.1 N.D. N.D. N.D.
nitrogen source NAG (N); with MOPS -0.5 +0.2 N.D. N.D. N.D.
carbon source L-Isoleucine (C) -0.4 +0.2 N.D. N.D. N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.5 -0.3 N.D. N.D. N.D.
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +0.2 N.D. N.D. N.D.
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.5 +0.2 N.D. N.D. N.D.
carbon source p-Coumaric (C) 5 mM +0.6 +0.1 N.D. N.D. N.D.
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