Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS29485 and PFLU_RS29490 are separated by 22 nucleotidesPFLU_RS29490 and PFLU_RS29495 are separated by 185 nucleotidesPFLU_RS29495 and PFLU_RS29500 are separated by 10 nucleotidesPFLU_RS29500 and PFLU_RS29505 are separated by 167 nucleotides PFLU_RS29485: PFLU_RS29485 - DUF4870 domain-containing protein, at 6,546,362 to 6,546,730 _RS29485 PFLU_RS29490: PFLU_RS29490 - ribonuclease PH, at 6,546,753 to 6,547,475 _RS29490 PFLU_RS29495: PFLU_RS29495 - YicC family protein, at 6,547,661 to 6,548,524 _RS29495 PFLU_RS29500: PFLU_RS29500 - guanylate kinase, at 6,548,535 to 6,549,155 _RS29500 PFLU_RS29505: PFLU_RS29505 - DNA-directed RNA polymerase subunit omega, at 6,549,323 to 6,549,586 _RS29505
Group Condition PFLU_RS29485 PFLU_RS29490 PFLU_RS29495 PFLU_RS29500 PFLU_RS29505
stress Glucose (C) and L-Glutamine (N); with MOPS; with chloride +0.3 -3.8 +0.1 N.D. -3.7
no stress control Glycine betaine (C)(N); with MOPS -0.2 -2.5 -0.9 N.D. -2.2
no stress control Glycine betaine (C)(N); with MOPS -0.0 -2.2 -0.4 N.D. -2.9
no stress control 4-Hydroxybenzoic Acid (C) and Ammonium chloride (N); with MOPS +0.6 -2.6 -0.8 N.D. -1.2
pH Growth at pH9 and (C) Trisodium citrate -1.2 -2.7 -1.6 N.D. +2.2
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS +1.2 -1.2 -1.1 N.D. -2.1
carbon and nitrogen source NAG carbon and (N) -0.3 -3.6 -0.9 N.D. +1.8
carbon source NAG (C) -0.9 -2.7 -1.4 N.D. +2.2
carbon and nitrogen source NAG carbon and (N) -0.5 -1.9 -2.0 N.D. +2.3
carbon source L-Arabinose (C) +0.4 -3.1 -0.6 N.D. +1.5
carbon source L-Arabinose (C) -0.3 -2.7 -0.5 N.D. +2.1
carbon source L-Arabinose (C) +0.4 -2.5 -0.9 N.D. +1.8
carbon source propionate (C) -1.1 -2.0 -0.5 N.D. +2.5
carbon source L-tyrosine 10 mM (C) -0.5 -2.3 -0.8 N.D. +2.5
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.7 -2.4 -0.7 N.D. +1.6
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.7 -2.9 -0.0 N.D. +3.0
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.2 -3.1 -0.0 N.D. +2.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -1.1 -1.8 +0.2 N.D. +3.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.9 -2.6 -0.2 N.D. +2.6
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.6 -2.3 +0.3 N.D. +2.2
carbon source propionate 20 mM (C) -1.9 -1.1 +0.7 N.D. +3.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +0.1 -2.3 +0.9 N.D. +2.5
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -0.1 -2.4 +0.4 N.D. +3.5
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.1 -2.5 +0.4 N.D. +3.6
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -0.3 -2.0 +0.6 N.D. +3.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.5 -2.3 +0.2 N.D. +3.4
carbon source p-Coumaric (C) 5 mM +0.5 +4.3 +1.3 N.D. -1.6
carbon source p-Coumaric (C) 5 mM -0.2 +4.6 +1.3 N.D. -0.1
carbon source p-Coumaric (C) 5 mM +1.3 +4.4 +1.8 N.D. -1.3
carbon source p-Coumaric (C) 5 mM +0.6 +4.5 +1.3 N.D. +0.4
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