Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS29385 and PFLU_RS29390 are separated by 14 nucleotidesPFLU_RS29390 and PFLU_RS29395 are separated by 115 nucleotidesPFLU_RS29395 and PFLU_RS29400 are separated by 1 nucleotidesPFLU_RS29400 and PFLU_RS29405 are separated by 166 nucleotides PFLU_RS29385: PFLU_RS29385 - AsnC family transcriptional regulator, at 6,527,833 to 6,528,321 _RS29385 PFLU_RS29390: PFLU_RS29390 - YkgJ family cysteine cluster protein, at 6,528,336 to 6,528,689 _RS29390 PFLU_RS29395: PFLU_RS29395 - FAD-binding oxidoreductase, at 6,528,805 to 6,530,097 _RS29395 PFLU_RS29400: PFLU_RS29400 - DUF1127 domain-containing protein, at 6,530,099 to 6,530,323 _RS29400 PFLU_RS29405: PFLU_RS29405 - PLP-dependent aminotransferase family protein, at 6,530,490 to 6,531,914 _RS29405
Group Condition PFLU_RS29385 PFLU_RS29390 PFLU_RS29395 PFLU_RS29400 PFLU_RS29405
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.9 -1.4 +0.2 -5.3 -0.1
carbon source L-Alanine 15 mM (C) -4.2 -0.3 -0.0 -0.8 -0.0
carbon source L-Alanine 15 mM (C) -4.1 -0.4 +0.1 -0.3 +0.0
carbon source L-Alanine 15 mM (C) -4.4 -0.2 -0.0 +0.2 +0.1
carbon source 4-Acetoxy-3-methoxycinnamic 2 mM (C) +0.4 +0.2 -0.0 -4.5 -0.3
no stress control Glycine betaine (C)(N); with TAPS -0.7 +0.1 -0.0 -3.4 -0.1
temperature shift Temperature shift 30_to_25; with MOPS +0.4 -0.6 +0.1 -3.4 -0.2
pH Growth at pH8 and (C) D-Glucose +0.6 +0.4 +0.1 -4.8 +0.1
stress Betaine (C)(N); with TAPS; with chloride -0.0 +0.2 -0.2 -3.7 +0.2
temperature Growth at 25C +0.4 -0.9 +0.0 -2.6 -0.0
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.4 +0.5 +0.0 -3.2 +0.0
carbon source L-Hydroxyproline (C) +0.3 +0.1 -0.0 -3.2 +0.0
carbon source sn-glycero-3-phosphocholine 10 mM (C) +0.1 +0.5 +0.0 -3.2 -0.0
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride +0.8 +0.1 -0.0 -3.2 -0.1
carbon source Ferulic Acid 2 mM (C) +0.9 -0.4 +0.0 -2.4 -0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.8 +0.2 +0.2 -3.2 +0.1
stress Betaine (C)(N); with MOPS; with chloride +0.3 +0.7 -0.1 -2.5 -0.1
pH Growth at pH9 and (C) Trisodium citrate +1.4 +0.6 +0.2 -3.9 +0.0
temperature shift Temperature shift 10_to_21 +0.4 +0.4 +0.1 -2.5 -0.0
carbon source caffeic 2 mM (C) +0.4 +0.4 -0.2 -2.2 +0.1
stress Betaine (C)(N); with TAPS; with chloride +0.1 +1.1 -0.2 -2.6 +0.2
pH Growth at pH9 and (C) D-Glucose +1.0 +0.4 +0.1 -2.5 -0.0
carbon source Xanthosine (C) +0.8 +0.5 +0.1 -2.3 +0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.8 +0.1 +0.3 -2.0 +0.1
carbon source Ferulic Acid 2 mM (C) +0.9 +1.0 -0.0 -1.8 -0.0
pH Growth at pH8 and (C) Trisodium citrate +1.2 +1.2 +0.1 -2.1 +0.1
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.8 -1.6 +0.2 +1.3 +0.3
carbon source Inosine (C) +0.1 -0.6 -0.1 +2.4 +0.4
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride +1.0 -0.8 +0.1 +1.9 +0.1
carbon source Xanthosine (C) +0.8 +1.2 +0.4 +0.8 +0.2
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