Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

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500 ntPFLU_RS29335 and PFLU_RS29340 are separated by 63 nucleotidesPFLU_RS29340 and PFLU_RS29345 are separated by 256 nucleotidesPFLU_RS29345 and PFLU_RS29350 are separated by 58 nucleotidesPFLU_RS29350 and PFLU_RS29355 are separated by 148 nucleotides PFLU_RS29335: PFLU_RS29335 - NorM family multidrug efflux MATE transporter, at 6,515,402 to 6,516,805 _RS29335 PFLU_RS29340: PFLU_RS29340 - bifunctional diguanylate cyclase/phosphodiesterase, at 6,516,869 to 6,518,533 _RS29340 PFLU_RS29345: PFLU_RS29345 - DNA helicase Rep, at 6,518,790 to 6,520,799 _RS29345 PFLU_RS29350: PFLU_RS29350 - xanthine phosphoribosyltransferase, at 6,520,858 to 6,521,430 _RS29350 PFLU_RS29355: PFLU_RS29355 - acetyl-CoA hydrolase/transferase family protein, at 6,521,579 to 6,523,501 _RS29355
Group Condition PFLU_RS29335 PFLU_RS29340 PFLU_RS29345 PFLU_RS29350 PFLU_RS29355
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.2 -2.6 N.D. -0.1 +0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.0 -2.5 N.D. +0.0 -0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.1 -2.6 N.D. +0.1 +0.1
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.2 -2.7 N.D. +0.1 +0.0
carbon source L-Ornithine 10 mM (C) -0.1 -1.9 N.D. -0.2 +0.1
carbon source D-Xylose 10 mM (C) -0.2 -1.3 N.D. -0.7 +0.0
no stress control Ferulic (C) and Ammonium chloride (N); with MOPS +0.1 -2.2 N.D. +0.1 -0.0
stress Betaine (C)(N); with TAPS; with chloride +0.2 -1.5 N.D. -0.7 +0.2
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS +0.1 -1.7 N.D. -0.3 +0.2
carbon source L-Ornithine 10 mM (C) +0.0 -2.0 N.D. -0.0 +0.4
stress Betaine (C)(N); with MOPS; with chloride -0.6 -1.1 N.D. +0.4 -0.1
no stress control Glucose (C) and nitrate (N); with MOPS -0.1 -1.7 N.D. +0.4 +0.0
carbon source L-Ornithine 10 mM (C) +0.1 -1.6 N.D. -0.1 +0.2
carbon source Arabitol 10 mM (C) -0.0 -1.7 N.D. +0.3 +0.1
no stress control Glycine betaine (C)(N); with MOPS -0.2 -0.7 N.D. -0.8 +0.5
temperature Growth at 34C; with MOPS +0.2 -1.6 N.D. +0.3 -0.1
stress Betaine (C)(N); with TAPS; with chloride +0.2 -1.4 N.D. +0.4 -0.0
carbon source Ferulic Acid 2 mM (C) +0.4 -1.1 N.D. -0.3 +0.3
carbon source Xanthosine (C) -0.1 -1.2 N.D. +0.7 +0.0
carbon and nitrogen source NAG carbon and (N) -0.4 -0.7 N.D. +1.1 +0.2
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride +0.5 +1.1 N.D. -0.5 -0.2
carbon source D-Galactose (C) +0.0 +1.9 N.D. -0.2 +0.0
carbon source D-Glucuronic (C) -0.1 +1.3 N.D. +0.6 -0.1
carbon source Glycerol (C) +0.2 +1.2 N.D. +0.5 -0.2
carbon source Inosine (C) -0.1 +1.2 N.D. +0.8 -0.1
carbon source D-Galactose (C) -0.0 +1.6 N.D. +0.3 -0.1
carbon source L-Hydroxyproline (C) +0.1 +1.4 N.D. +0.7 +0.1
carbon source D-Glucuronic (C) -0.1 +1.6 N.D. +0.7 +0.1
carbon source L-Valine (C) -0.2 +1.9 N.D. +0.9 +0.1
carbon source 4-Aminobutyric (C) -0.0 +2.3 N.D. +0.8 +0.3
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