Fitness for 5 genes in Pseudomonas fluorescens SBW25-INTG

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1213 experiments or choose conditions or try the comparative fitness browser

500 ntPFLU_RS29295 and PFLU_RS29300 are separated by 211 nucleotidesPFLU_RS29300 and PFLU_RS29305 are separated by 34 nucleotidesPFLU_RS29305 and PFLU_RS29310 are separated by 420 nucleotidesPFLU_RS29310 and PFLU_RS29315 are separated by 6 nucleotides PFLU_RS29295: PFLU_RS29295 - YjbQ family protein, at 6,507,012 to 6,507,437 _RS29295 PFLU_RS29300: PFLU_RS29300 - ammonium transporter, at 6,507,649 to 6,508,989 _RS29300 PFLU_RS29305: PFLU_RS29305 - P-II family nitrogen regulator, at 6,509,024 to 6,509,362 _RS29305 PFLU_RS29310: PFLU_RS29310 - accessory factor UbiK family protein, at 6,509,783 to 6,510,043 _RS29310 PFLU_RS29315: PFLU_RS29315 - hypothetical protein, at 6,510,050 to 6,510,513 _RS29315
Group Condition PFLU_RS29295 PFLU_RS29300 PFLU_RS29305 PFLU_RS29310 PFLU_RS29315
carbon source Xanthosine (C) -1.2 -0.2 N.D. -2.2 -2.2
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -0.4 -0.1 N.D. -1.7 -3.5
no stress control p-Coumaric (C) and Ammonium chloride (N); with TAPS -1.0 -0.3 N.D. -2.6 -1.8
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -1.6 -0.3 N.D. -2.6 -1.1
carbon source Xanthosine (C) -1.1 -0.1 N.D. -2.2 -1.9
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7 -0.8 N.D. -3.3 -0.4
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -1.8 +0.0 N.D. -2.8 -0.3
stress D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS; with chloride -1.7 -0.1 N.D. -2.7 -0.3
stress Glucose (C) and Betaine (N); with MOPS; with chloride -0.1 -2.5 N.D. -2.7 +0.5
stress p-Coumaric (C) and Ammonium chloride (N); with TAPS -1.5 -0.2 N.D. -2.7 -0.3
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.3 -0.1 N.D. -3.1 -1.2
carbon source D-Mannitol (C) -1.3 -0.4 N.D. -2.6 -0.3
stress Betaine (C)(N); with TAPS; with chloride -1.6 +0.1 N.D. -2.8 -0.1
temperature Growth at 30C -1.2 +0.0 N.D. -3.1 -0.1
stress Betaine (C)(N); with TAPS; with chloride -0.3 +0.0 N.D. -2.8 -1.2
pH Growth at pH8 and (C) Trisodium citrate -1.0 -0.2 N.D. +0.3 -3.2
no stress control Glucose (C) and Betaine (N); with MOPS -0.5 -2.2 N.D. -1.5 +0.2
stress Glucose (C) and Betaine (N); with MOPS; with chloride -0.5 -2.8 N.D. -1.4 +0.7
stress Glucose (C) and Betaine (N); with MOPS; with chloride -0.1 -2.3 N.D. -1.7 +0.3
stress Glucose (C) and Betaine (N); with MOPS; with chloride -0.7 -2.5 N.D. -0.9 +0.5
stress Glucose (C) and Ammonium chloride (N); with MOPS; with chloride -2.2 -0.0 N.D. -1.9 +0.6
stress Betaine (C)(N); with TAPS; with chloride -0.8 -0.2 N.D. -2.8 +0.5
no stress control D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS -1.0 -0.0 N.D. -2.8 +0.5
stress D,L-Malic Acid (C) and Ammonium chloride (N); with MOPS; with chloride -1.0 -0.4 N.D. -2.8 +1.0
no stress control D,L-Malic Acid (C) and Ammonium chloride (N); with TAPS -0.9 +0.2 N.D. -2.7 +1.0
carbon source L-Ornithine (C) +3.0 +0.1 N.D. -1.6 +0.0
carbon source L-Ornithine 10 mM (C) +3.5 +0.2 N.D. -1.8 -0.2
carbon source L-Ornithine 10 mM (C) +4.1 -0.1 N.D. -2.1 -0.1
carbon source L-Ornithine 10 mM (C) +3.8 +0.5 N.D. -2.5 +0.6
carbon source L-Ornithine (C) +3.3 +0.2 N.D. -0.8 -0.1
remove
PFLU_RS29295
plot		 remove
PFLU_RS29300
plot		 remove
PFLU_RS29305		 remove
PFLU_RS29310
plot		 remove
PFLU_RS29315
plot